RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 FAM210AQ96ND0 272 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 V9GYS6 101 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 CD3DP04234 171 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 IL5P05113 134 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 CELA3AP09093 270 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 RFC3P40938 356 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 LHX2P50458 406 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 ZNF260Q3ZCT1 412 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 RIPPLY2Q5TAB7 128 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 STEAP1BQ6NZ63 245 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 Q6ZTK2 550 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 GABRG1Q8N1C3 465 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 ASCC1Q8N9N2 400 aaKnown RBP17.75■□□□□ 0.43
CCM2-203ENST00000461377 SSC4DQ8WTU2 575 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 SPTSSAQ969W0 71 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 TMEM45BQ96B21 275 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 ALKBH3Q96Q83 286 aaPredicted RBP17.75■□□□□ 0.43
CCM2-203ENST00000461377 TTTY12Q9BZ98 90 aa17.75■□□□□ 0.43
CCM2-203ENST00000461377 ZNF107Q9UII5 783 aaPredicted RBP17.75■□□□□ 0.43
CCM2-203ENST00000461377 TNFRSF10AO00220 468 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 DBHP09172 617 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 CRYGSP22914 178 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 TAS2R19P59542 299 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 SEZ6L2Q6UXD5 910 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 IL22RA1Q8N6P7 574 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 ABHD3Q8WU67 409 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 HYLS1Q96M11 299 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 SPACA5Q96QH8 159 aa17.74■□□□□ 0.43
CCM2-203ENST00000461377 MRPS28Q9Y2Q9 187 aaKnown RBP17.74■□□□□ 0.43
CCM2-203ENST00000461377 IGKV1-9A0A0C4DH69 117 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 SYNGR3O43761 229 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 SCGNO76038 276 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 ANXA7P20073 488 aaKnown RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 THBS4P35443 961 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 ZP1P60852 638 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 OR2W3Q7Z3T1 314 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 CCDC54Q8NEL0 328 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 DVL3Q92997 716 aaPredicted RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 C1orf147Q96MC9 270 aaPredicted RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 NUDT16L1Q9BRJ7 211 aaKnown RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 SEC22CQ9BRL7 303 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 SLA2Q9H6Q3 261 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 ZMAT3Q9HA38 289 aaKnown RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 PARD6AQ9NPB6 346 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 ELF5Q9UKW6 265 aaPredicted RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 NPTNQ9Y639 398 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 TMEM235A6NFC5 223 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 PYCARD-AS1I3L0S3 204 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 SGCEO43556 437 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 DHRS3O75911 302 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 CLDN18P56856 261 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 CSRP2Q16527 193 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 GLIPR1L1Q6UWM5 242 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 DTX1Q86Y01 620 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 OR8S1Q8NH09 359 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 GINS4Q9BRT9 223 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 GPR35Q9HC97 309 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 NPDC1Q9NQX5 325 aaPredicted RBP17.73■□□□□ 0.43
CCM2-203ENST00000461377 ING4Q9UNL4 249 aa17.73■□□□□ 0.43
CCM2-203ENST00000461377 NCOA6Q14686 2063 aaPredicted RBP17.72■□□□□ 0.43
CCM2-203ENST00000461377 AHCTF1Q8WYP5 2266 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 IGKV3D-15A0A087WSY6 115 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 FAM166BA8MTA8 275 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 FCER2P06734 321 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 HCKP08631 526 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 GSTT2P0CG29 244 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 PRF1P14222 555 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 MAGEA5P43359 124 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 OR3A4PP47883 348 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 GSK3AP49840 483 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 SCRN3Q0VDG4 424 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 ECH1Q13011 328 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 CEACAM16Q2WEN9 425 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 LAMTOR1Q6IAA8 161 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 MDS2Q8NDY4 140 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 OR51S1Q8NGJ8 323 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 FOXB1Q99853 325 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 KLK13Q9UKR3 277 aa17.72■□□□□ 0.43
CCM2-203ENST00000461377 SNRPGP15A8MWD9 76 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 MELTFP08582 738 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 B4GALT1P15291 398 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 HYAL4Q2M3T9 481 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 DRAM2Q6UX65 266 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 TMEM251Q8N6I4 163 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 CMBLQ96DG6 245 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 OR10A2Q9H208 303 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 RANBP3Q9H6Z4 567 aaPredicted RBP17.71■□□□□ 0.43
CCM2-203ENST00000461377 NME2P1O60361 137 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 ALX3O95076 343 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 RAB3DO95716 219 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 CD74P04233 296 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 ZNF708P17019 499 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 NME2P22392 152 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 KRTAP27-1Q3LI81 207 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 CDNFQ49AH0 187 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 ZNF626Q68DY1 528 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 ZNF774Q6NX45 483 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 SLC36A1Q7Z2H8 476 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 ZNF101Q8IZC7 436 aa17.71■□□□□ 0.43
CCM2-203ENST00000461377 OR1F12Q8NHA8 337 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms