RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 UQCC3Q6UW78 93 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 MR1Q95460 341 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 SMIM10Q96HG1 83 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 ULBP2Q9BZM5 246 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 IFT22Q9H7X7 185 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 LMAN1LQ9HAT1 526 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 IFNA2P01563 188 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 GABRG2P18507 467 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 AKR1C8PQ5T2L2 129 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 MISPQ8IVT2 679 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 ZNF695Q8IW36 515 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 NANPQ8TBE9 248 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 PFDN5Q99471 154 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 ZNF2Q9BSG1 426 aaPredicted RBP12.93□□□□□ -0.34
NCL-207ENST00000461347 WWTR1Q9GZV5 400 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 CHRDQ9H2X0 955 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 SPACA1Q9HBV2 294 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 SLC22A11Q9NSA0 550 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 KLHL13Q9P2N7 655 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 ZNF217O75362 1048 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 DUS4LO95620 317 aaKnown RBP12.93□□□□□ -0.34
NCL-207ENST00000461347 GP1BAP07359 652 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 RAB32Q13637 225 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 SOHLH1Q5JUK2 328 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 FGF11Q92914 225 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 PHYHIPLQ96FC7 376 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 C2orf50Q96LR7 162 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 NXT1Q9UKK6 140 aaKnown RBP12.93□□□□□ -0.34
NCL-207ENST00000461347 KCNMB2Q9Y691 235 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 ASXL3Q9C0F0 2248 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 CRHP06850 196 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 TBPP20226 339 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 LAP3P28838 519 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 PNLIPRP2P54317 469 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 PJVKQ0ZLH3 352 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 MFAP5Q13361 173 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 BATF2Q8N1L9 274 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 CCDC71LQ8N9Z2 235 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 DTWD2Q8NBA8 298 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 OR9K2Q8NGE7 335 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 GPBAR1Q8TDU6 330 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 CTSFQ9UBX1 484 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 PCOLCE2Q9UKZ9 415 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 FLVCR1Q9Y5Y0 555 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 FREM3P0C091 2139 aa12.93□□□□□ -0.34
NCL-207ENST00000461347 ZFAND5O76080 213 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 DBHP09172 617 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 QDPRP09417 244 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 ZNF44P15621 663 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 EPHA1P21709 976 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 ZNF121P58317 390 aaPredicted RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 MGAT2Q10469 447 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 FUT7Q11130 342 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 CTHRC1Q96CG8 243 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 ARHGAP5-AS1Q96IT6 56 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 AKR1E2Q96JD6 320 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 UNKLQ9H9P5 680 aaKnown RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 TNFSF18Q9UNG2 199 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 SRPK3Q9UPE1 567 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 FAM221AA4D161 298 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 XRCC2O43543 280 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 FOXS1O43638 330 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 FOXF1Q12946 379 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 RAB30Q15771 203 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 PCK2Q16822 640 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 LANCL3Q6ZV70 420 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 MCEMP1Q8IX19 187 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 GPR137CQ8N3F9 429 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 ARL5BQ96KC2 179 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 MMP17Q9ULZ9 603 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 VSIG4Q9Y279 399 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 NPTNQ9Y639 398 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 IFNA5P01569 189 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 CFIP05156 583 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 ZNF728P0DKX0 622 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 GUCA2BQ16661 112 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 CPEB2Q7Z5Q1 589 aaKnown RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 ADAD2Q8NCV1 583 aaKnown RBP12.92□□□□□ -0.34
NCL-207ENST00000461347 OR5L1Q8NGL2 311 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 SCGB1C1Q8TD33 95 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 FN3KRPQ9HA64 309 aa12.92□□□□□ -0.34
NCL-207ENST00000461347 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.91□□□□□ -0.34
NCL-207ENST00000461347 A0A1B0GX78 115 aa12.91□□□□□ -0.34
NCL-207ENST00000461347 FGF2P09038 288 aa12.91□□□□□ -0.34
NCL-207ENST00000461347 GSTP1P09211 210 aaKnown RBP12.91□□□□□ -0.34
NCL-207ENST00000461347 GLRA1P23415 457 aa12.91□□□□□ -0.34
NCL-207ENST00000461347 APOBEC1P41238 236 aaKnown RBP12.91□□□□□ -0.34
NCL-207ENST00000461347 TAF9Q16594 264 aa12.91□□□□□ -0.34
NCL-207ENST00000461347 GPR157Q5UAW9 335 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms