RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GCM1Q9NP62 436 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 LRRC30A6NM36 301 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 IFNL4K9M1U5 179 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 PLPP2O43688 288 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 IRF2P14316 349 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 CA6P23280 308 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 ANOS1P23352 680 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 EPHA2P29317 976 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 RBMXP38159 391 aaKnown RBP12.97□□□□□ -0.33
VARS-219ENST00000461328 BTG1P62324 171 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 LRRN1Q6UXK5 716 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 KRT77Q7Z794 578 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 SPICQ8N5J4 248 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 OR52H1Q8NGJ2 320 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
VARS-219ENST00000461328 REEP6Q96HR9 211 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 RAB3IPQ96QF0 476 aaPredicted RBP12.97□□□□□ -0.33
VARS-219ENST00000461328 IL4I1Q96RQ9 567 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 CNN2Q99439 309 aaKnown RBP12.97□□□□□ -0.33
VARS-219ENST00000461328 PKP2Q99959 881 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 RBM4BQ9BQ04 359 aaKnown RBP12.97□□□□□ -0.33
VARS-219ENST00000461328 REPIN1Q9BWE0 567 aaKnown RBP12.97□□□□□ -0.33
VARS-219ENST00000461328 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 KLHDC2Q9Y2U9 406 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 ORC6Q9Y5N6 252 aa12.97□□□□□ -0.33
VARS-219ENST00000461328 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 CCDC182A6NF36 153 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 ANKRD30BLA7E2S9 258 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 PNPP00491 289 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 IGHV2-70P01814 119 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 CFL1P23528 166 aaKnown RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 KRTAP24-1Q3LI83 254 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 C12orf73Q69YU5 71 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 KCTD18Q6PI47 426 aaPredicted RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 RHOUQ7L0Q8 258 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 GID4Q8IVV7 300 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 C10orf67Q8IYJ2 551 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 C1orf87Q8N0U7 546 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 KLHL36Q8N4N3 616 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 RFLNBQ8N5W9 214 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 OR11L1Q8NGX0 322 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 DVL3Q92997 716 aaPredicted RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 TEAD3Q99594 435 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 TTTY10Q9BZA0 68 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 METTL17Q9H7H0 456 aaPredicted RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 MRPL15Q9P015 296 aaKnown RBP12.96□□□□□ -0.33
VARS-219ENST00000461328 METRNQ9UJH8 293 aa12.96□□□□□ -0.33
VARS-219ENST00000461328 A0A0G2JMP0 313 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 A0A0X1KG70 313 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 SLC22A31A6NKX4 558 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 TCF21O43680 179 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 CYB5R3P00387 301 aaPredicted RBP12.95□□□□□ -0.34
VARS-219ENST00000461328 MDH2P40926 338 aaKnown RBP12.95□□□□□ -0.34
VARS-219ENST00000461328 HCCSP53701 268 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 PSMA6P60900 246 aaKnown RBP12.95□□□□□ -0.34
VARS-219ENST00000461328 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 PRAMEF6Q5VXH4 476 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
VARS-219ENST00000461328 TEX29Q8N6K0 151 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 OR4M2Q8NGB6 313 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 SIGLEC11Q96RL6 698 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 NIPAL2Q9H841 368 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 G6PC2Q9NQR9 355 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 IKZF2Q9UKS7 526 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 TMEM14AQ9Y6G1 99 aa12.95□□□□□ -0.34
VARS-219ENST00000461328 A6NLC8 198 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 H3BNX3 289 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 PSMD9O00233 223 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 EI24O14681 340 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 GMDSO60547 372 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 ZNF205O95201 554 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 ALOX5APP20292 161 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 GNALP38405 381 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 DDOSTP39656 456 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 CD200P41217 278 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 LCN2P80188 198 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 MZT1Q08AG7 82 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 SCGB2A2Q13296 93 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 TMEM155Q4W5P6 130 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 DCAF12L2Q5VW00 463 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 NXNL2Q5VZ03 156 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 MEPCEQ7L2J0 689 aaKnown RBP12.94□□□□□ -0.34
VARS-219ENST00000461328 CELF2-AS1Q8N7Q2 184 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 OR8S1Q8NH09 359 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 ASB17Q8WXJ9 295 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 SPSB4Q96A44 273 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 PAPOLGQ9BWT3 736 aaKnown RBP12.94□□□□□ -0.34
VARS-219ENST00000461328 OSBPL10Q9BXB5 764 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 MROQ9BYG7 248 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 RGCCQ9H4X1 137 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms