RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CCL8P80075 99 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 GK2Q14410 553 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TIGD6Q17RP2 521 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 LRRN1Q6UXK5 716 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 FAM57BQ71RH2 274 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF679Q8IYX0 411 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 DHRSXQ8N5I4 330 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 OR2T27Q8NH04 317 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 RHOXF1Q8NHV9 184 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PGAM5Q96HS1 289 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 AMELYQ99218 206 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 MYCBPQ99417 103 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 RGCCQ9H4X1 137 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SAP30LQ9HAJ7 183 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 MSL2Q9HCI7 577 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TMEM100Q9NV29 134 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 IKZF2Q9UKS7 526 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 NOP16Q9Y3C1 178 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PCDHGB1Q9Y5G3 927 aa11.25□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZSCAN5BA6NJL1 495 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SLC2A1P11166 492 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TNFRSF1AP19438 455 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 COL8A2P25067 703 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PEX2P28328 305 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 DDOSTP39656 456 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CRYBB2P43320 205 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CXCR4P61073 352 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TNFAIP6P98066 277 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ROM1Q03395 351 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF92Q03936 586 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 EGR3Q06889 387 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SNCBQ16143 134 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CR1LQ2VPA4 569 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF829Q3KNS6 432 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SNAI3Q3KNW1 292 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 GLYATL3Q5SZD4 288 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 OGFRL1Q5TC84 451 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 LIPNQ5VXI9 398 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF322Q6U7Q0 402 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 GLCCI1Q86VQ1 547 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 OR5AS1Q8N127 324 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 OR2Z1Q8NG97 314 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CYGBQ8WWM9 190 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ELMOD3Q96FG2 381 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 OR8B4Q96RC9 309 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SLC22A4Q9H015 551 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF391Q9UJN7 358 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 KLHDC2Q9Y2U9 406 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 LRP12Q9Y561 859 aa11.24□□□□□ -0.61
RAB11FIP3-207ENST00000461009 IGHV1-69-2A0A0G2JMI3 117 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TMEM269A0A1B0GVZ9 245 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 KRT8P05787 483 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CD55P08174 381 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 DVL1P1P54792 670 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CDH15P55291 814 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 HFEQ30201 348 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TMEM255AQ5JRV8 349 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ENTHD1Q8IYW4 607 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TEX29Q8N6K0 151 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SETD9Q8NE22 299 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 OR10H4Q8NGA5 316 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 GTF3AQ92664 365 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ITFG2Q969R8 447 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SGK3Q96BR1 496 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 MRPL48Q96GC5 212 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 TIMD4Q96H15 378 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 REEP6Q96HR9 211 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SLC30A2Q9BRI3 323 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 RNPEPL1Q9HAU8 725 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF275Q9NSD4 429 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 IL19Q9UHD0 177 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 COPS3Q9UNS2 423 aa11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-207ENST00000461009 A0A1W2PQL4 384 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 CD300LBA8K4G0 201 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PSMD9O00233 223 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 DLGAP1O14490 977 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 GABRB1P18505 474 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 SRP9P49458 86 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PSMA6P60900 246 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ACTC1P68032 377 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ACTA1P68133 377 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 IL5RAQ01344 420 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 MZT1Q08AG7 82 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 IL18R1Q13478 541 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 Q6ZR03 302 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PLEKHG7Q6ZR37 379 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 PRSS45Q7RTY3 260 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 KCTD20Q7Z5Y7 419 aa11.22□□□□□ -0.61
RAB11FIP3-207ENST00000461009 BHLHE23Q8NDY6 225 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms