RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 TEX261Q6UWH6 196 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 SLC16A13Q7RTY0 426 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 NKAIN4Q8IVV8 208 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 CT45A3Q8NHU0 189 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 U3KQ87 197 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 A0A087X0M5 115 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 A0A1B0GX30 115 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 RAB7AP51149 207 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 DUSP2Q05923 314 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 C4orf17Q53FE4 359 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 ABLIM2Q6H8Q1 611 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 GPR119Q8TDV5 335 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 PLK3Q9H4B4 646 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 PLA2G3Q9NZ20 509 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 CEP290O15078 2479 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 A0A0A6YYD5 115 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 LGALS8O00214 317 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 UPK1AO00322 258 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 BET1O15155 118 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 FABP9Q0Z7S8 132 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 EDDM3AQ14507 147 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 Q6ZTK2 550 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 LHFPL2Q6ZUX7 228 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 VASH2Q86V25 355 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 OR52N1Q8NH53 320 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 CNRIP1Q96F85 164 aaPredicted RBP9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 UHRF2Q96PU4 802 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 GABARAPL3Q9BY60 117 aa9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 ZNF71Q9NQZ8 489 aaPredicted RBP9.69□□□□□ -0.86
AMBRA1-202ENST00000458649 RBBP6Q7Z6E9 1792 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 C5orf49A4QMS7 147 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 OR6C68A6NDL8 312 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 FCMRO60667 390 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 CNIH1O95406 144 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 ACSM4P0C7M7 580 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 OPRM1P35372 400 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 NKG7Q16617 165 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 USP51Q70EK9 711 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 BCDIN3DQ7Z5W3 292 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 OR1J1Q8NGS3 322 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 LHFPL5Q8TAF8 219 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SDSLQ96GA7 329 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SLCO1C1Q9NYB5 712 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 TRABD2BA6NFA1 517 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 M0QZ24 198 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SOCS6O14544 535 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 PDGFBP01127 241 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 HOXD4P09016 255 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 CLEC2LP0C7M8 214 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 KITLGP21583 273 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 GLRA1P23415 457 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RPL29P47914 159 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 HOXA1P49639 335 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 THBS3P49746 956 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RPS18P62269 152 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RAC1P63000 192 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 TIAL1Q01085 375 aaKnown RBP eCLIP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 FOXF1Q12946 379 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 CTU2Q2VPK5 515 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 C15orf54Q8N8G6 183 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 OR52I1Q8NGK6 324 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 OR5M9Q8NGP3 310 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 CMTM3Q96MX0 182 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 C1QTNF6Q9BXI9 259 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RAB1BQ9H0U4 201 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SLC6A13Q9NSD5 602 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RAB22AQ9UL26 194 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SERTM1A2A2V5 107 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 HABP2Q14520 560 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SLC9A3R2Q15599 337 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SMIM21Q3B7S5 101 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 ANKRD34AQ69YU3 496 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 PET117Q6UWS5 81 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 D2HGDHQ8N465 521 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SIGLECL1Q8N7X8 197 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 FAM71CQ8NEG0 241 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 ARID1BQ8NFD5 2236 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 APOBEC3DQ96AK3 386 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RASD2Q96D21 266 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 ATF6BQ99941 703 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 CACFD1Q9UGQ2 172 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 ACTL6AO96019 429 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 TMIGD3P0DMS9 266 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 ZNF25P17030 456 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 RFC3P40938 356 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 PDLIM3Q53GG5 364 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 UQCC3Q6UW78 93 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 TEX29Q8N6K0 151 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 OR2I1PQ8NGU4 316 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 NUBPLQ8TB37 319 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 S1PR3Q99500 378 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 SLC25A21Q9BQT8 299 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 DUSP21Q9H596 190 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 WDR54Q9H977 334 aa9.68□□□□□ -0.86
AMBRA1-202ENST00000458649 MIOXQ9UGB7 285 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms