RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 COMMD1Q8N668 190 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 ZNF251Q9BRH9 671 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 LAT2Q9GZY6 243 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 KPTNQ9Y664 436 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.43
SNX27-204ENST00000458013 JUNBP17275 347 aaPredicted RBP17.77■□□□□ 0.43
SNX27-204ENST00000458013 ADRA2CP18825 462 aa17.77■□□□□ 0.43
SNX27-204ENST00000458013 PMCHP20382 165 aa17.77■□□□□ 0.43
SNX27-204ENST00000458013 TCTN3Q6NUS6 607 aa17.77■□□□□ 0.43
SNX27-204ENST00000458013 DHRS4L2Q6PKH6 230 aa17.77■□□□□ 0.43
SNX27-204ENST00000458013 A0A1W2PPQ1 181 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 TMPRSS11FQ6ZWK6 438 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 ANKLE1Q8NAG6 615 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 DHRS9Q9BPW9 319 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 S1PR5Q9H228 398 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 PIGMQ9H3S5 423 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 ACOT6Q3I5F7 207 aaPredicted RBP17.76■□□□□ 0.43
SNX27-204ENST00000458013 TSEN54Q7Z6J9 526 aaKnown RBP17.76■□□□□ 0.43
SNX27-204ENST00000458013 PRRG2O14669 202 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 CD22P20273 847 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 ARR3P36575 388 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 PCK2Q16822 640 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 NDRG4Q9ULP0 352 aaKnown RBP17.76■□□□□ 0.43
SNX27-204ENST00000458013 YKT6O15498 198 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 CST7O76096 145 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 BSGP35613 385 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 SPNS3Q6ZMD2 512 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 MISP3Q96FF7 219 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 KIR2DS1A0A191URI9 304 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 ARRB2P32121 409 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 KIR2DS4P43632 304 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 KIR2DS1Q14954 304 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 LHX4Q969G2 390 aa17.76■□□□□ 0.43
SNX27-204ENST00000458013 PSMB6P28072 239 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 CDC34P49427 236 aaPredicted RBP17.75■□□□□ 0.43
SNX27-204ENST00000458013 LIMK1P53667 647 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 SUMO1P63165 101 aaKnown RBP17.75■□□□□ 0.43
SNX27-204ENST00000458013 FOXC1Q12948 553 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 SIGLEC11Q96RL6 698 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 STRAPQ9Y3F4 350 aaKnown RBP17.75■□□□□ 0.43
SNX27-204ENST00000458013 TMEM129A0AVI4 362 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 IL2RAP01589 272 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 TCTN1Q2MV58 587 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ACOT7LQ6ZUV0 252 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ARIH2OSQ8N7S6 290 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 OR52N4Q8NGI2 321 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 KTI12Q96EK9 354 aaPredicted RBP17.75■□□□□ 0.43
SNX27-204ENST00000458013 FSCN3Q9NQT6 498 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 NAGKQ9UJ70 344 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ZNF391Q9UJN7 358 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ZNF17P17021 662 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 CCR2P41597 374 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 CYHR1Q6ZMK1 362 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 DEFB123Q8N688 67 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 OXGR1Q96P68 337 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 GFYI3L273 518 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ETV6P41212 452 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ZNF596Q8TC21 504 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 SMIM7Q9BQ49 75 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 GABARAPL3Q9BY60 117 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 IL10RAQ13651 578 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 ADGRG3Q86Y34 549 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 OR2Z1Q8NG97 314 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 OR4C16Q8NGL9 310 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 DPF1Q92782 380 aa17.75■□□□□ 0.43
SNX27-204ENST00000458013 WDR89Q96FK6 387 aaPredicted RBP17.75■□□□□ 0.43
SNX27-204ENST00000458013 IGHV3-43A0A0B4J1X8 118 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 IGHV3-43DP0DP04 118 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 VAMP3Q15836 100 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 RTL10Q7L3V2 364 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 C17orf78Q8N4C9 275 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 FBXO17Q96EF6 278 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 S1PR3Q99500 378 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 ADGRL4Q9HBW9 690 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 LAMA4Q16363 1823 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 RAF1P04049 648 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 ERHP84090 104 aaKnown RBP17.74■□□□□ 0.43
SNX27-204ENST00000458013 ASAH1Q13510 395 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 SLC17A1Q14916 467 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 MRGPRX1Q96LB2 322 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 CTDSP1Q9GZU7 261 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 PCBP4P57723 403 aaKnown RBP17.74■□□□□ 0.43
SNX27-204ENST00000458013 LRP11Q86VZ4 500 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 KCNK15Q9H427 330 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 DUSP22Q9NRW4 184 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 ZNF785A8K8V0 405 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 CHRM2P08172 466 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 BLNKQ8WV28 456 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 ARHGDIGQ99819 225 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 LIN7CQ9NUP9 197 aaKnown RBP17.74■□□□□ 0.43
SNX27-204ENST00000458013 TMEM30AQ9NV96 361 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 FAM96BQ9Y3D0 163 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 TAF1P21675 1872 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 FABP4P15090 132 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 BTG1P62324 171 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 WDR88Q6ZMY6 472 aa17.74■□□□□ 0.43
SNX27-204ENST00000458013 OR1J1Q8NGS3 322 aa17.73■□□□□ 0.43
SNX27-204ENST00000458013 TOX2Q96NM4 488 aa17.73■□□□□ 0.43
SNX27-204ENST00000458013 JAM3Q9BX67 310 aa17.73■□□□□ 0.43
SNX27-204ENST00000458013 PDFQ9HBH1 243 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms