RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 LYZL4Q96KX0 146 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 SIGLEC11Q96RL6 698 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 PBOV1Q9GZY1 135 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 ACOXLQ9NUZ1 547 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 ERVK13-1Q9NX77 482 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 RAB26Q9ULW5 256 aa12.03□□□□□ -0.48
SMPD4-215ENST00000457039 A0A0U1RQV5 110 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 IRGMA1A4Y4 181 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 XPNPEP2O43895 674 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 TTRP02766 147 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 HPXP02790 462 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 LIMS3P0CW19 117 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 LIMS4P0CW20 117 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 PIPP12273 146 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-215ENST00000457039 CFL1P23528 166 aaKnown RBP12.02□□□□□ -0.49
SMPD4-215ENST00000457039 DCKP27707 260 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 OR12D2P58182 307 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 OR8B8Q15620 311 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 PCGF3Q3KNV8 242 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 FAM209AQ5JX71 171 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 C6orf141Q5SZD1 244 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 KCTD20Q7Z5Y7 419 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 LHFPL3Q86UP9 236 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 EGFL6Q8IUX8 553 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 SYS1Q8N2H4 156 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 SLC30A2Q9BRI3 323 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 SOX7Q9BT81 388 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 ALG8Q9BVK2 526 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 FKBP14Q9NWM8 211 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 CNOT2Q9NZN8 540 aaKnown RBP12.02□□□□□ -0.49
SMPD4-215ENST00000457039 PSORS1C1Q9UIG5 152 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 ZNF391Q9UJN7 358 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 GNG8Q9UK08 70 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 OR52A1Q9UKL2 312 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 ZDHHC8Q9ULC8 765 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 DIMT1Q9UNQ2 313 aaKnown RBP12.02□□□□□ -0.49
SMPD4-215ENST00000457039 SNX5Q9Y5X3 404 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
SMPD4-215ENST00000457039 LOC110117498-PIK3R3F6TDL0 507 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 MLNRO43193 412 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 SPRY3O43610 288 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 SSX4O60224 188 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 RPP14O95059 124 aaKnown RBP12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ERCC1P07992 297 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-215ENST00000457039 CD55P08174 381 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ACTA2P62736 377 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ACTG2P63267 376 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 MVKQ03426 396 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 FDX2Q6P4F2 183 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 CATSPERDQ86XM0 798 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ELMOD2Q8IZ81 293 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ZNF525Q8N782 197 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 BHLHE23Q8NDY6 225 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 BPIFB6Q8NFQ5 453 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 OR56B2PQ8NGI1 322 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 C4orf36Q96KX1 117 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 DIRC2Q96SL1 478 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ZNF184Q99676 751 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-215ENST00000457039 MRPL15Q9P015 296 aaKnown RBP12.01□□□□□ -0.49
SMPD4-215ENST00000457039 CREBBPQ92793 2442 aa12.01□□□□□ -0.49
SMPD4-215ENST00000457039 ITPR3Q14573 2671 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 EFCAB10A6NFE3 127 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 GGT3PA6NGU5 568 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 J3QLW9 94 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 SLC1A7O00341 560 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 TACSTD2P09758 323 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 ZNF19P17023 458 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 ACKR3P25106 362 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 DDOSTP39656 456 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 PSMB10P40306 273 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 GSK3AP49840 483 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 ETV1P50549 477 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 CSNK2BP67870 215 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 CCL8P80075 99 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 MRPS11P82912 194 aaKnown RBP12□□□□□ -0.49
SMPD4-215ENST00000457039 ST3GAL4Q11206 333 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 TSTQ16762 297 aaKnown RBP12□□□□□ -0.49
SMPD4-215ENST00000457039 CLEC12BQ2HXU8 276 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 GFOD2Q3B7J2 385 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 SPRNQ5BIV9 151 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 WDR38Q5JTN6 314 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 BCL2L15Q5TBC7 163 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 Q6ZSR3 168 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 KRT74Q7RTS7 529 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 FAM220AQ7Z4H9 259 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 ZNF786Q8N393 782 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 PRSS35Q8N3Z0 413 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 PLPP7Q8NBV4 271 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 SPRYD4Q8WW59 207 aaPredicted RBP12□□□□□ -0.49
SMPD4-215ENST00000457039 PELI1Q96FA3 418 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 MRPL48Q96GC5 212 aaKnown RBP12□□□□□ -0.49
SMPD4-215ENST00000457039 TMEM80Q96HE8 168 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 RASSF4Q9H2L5 321 aa12□□□□□ -0.49
SMPD4-215ENST00000457039 ISG20L2Q9H9L3 353 aaKnown RBP12□□□□□ -0.49
SMPD4-215ENST00000457039 MYOZ1Q9NP98 299 aaPredicted RBP12□□□□□ -0.49
SMPD4-215ENST00000457039 GPR84Q9NQS5 396 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms