RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PRRG3Q9BZD7 231 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 UFSP2Q9NUQ7 469 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-203ENST00000456847 A0A1B0GWJ7 208 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 G3V2T6 193 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 TCF21O43680 179 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 RPS2P15880 293 aaKnown RBP13.63□□□□□ -0.23
CPSF6-203ENST00000456847 GATA3P23771 443 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 ZNF121P58317 390 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-203ENST00000456847 MAB21L1Q13394 359 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 ZNF181Q2M3W8 571 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 ESCO2Q56NI9 601 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 LCN1P1Q5VSP4 162 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 LIPNQ5VXI9 398 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 ZNF454Q8N9F8 522 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 OTOSQ8NHW6 89 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 SPATA3Q8NHX4 192 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 REEP6Q96HR9 211 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 TMPRSS13Q9BYE2 586 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 MRPL15Q9P015 296 aaKnown RBP13.63□□□□□ -0.23
CPSF6-203ENST00000456847 ARHGAP32A7KAX9 2087 aa13.63□□□□□ -0.23
CPSF6-203ENST00000456847 ANKRD30BLA7E2S9 258 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 CEACAM18A8MTB9 384 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 GMDSO60547 372 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 FAM20BO75063 409 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 FCGR1AP12314 374 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 OPRL1P41146 370 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 GATA4P43694 442 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 SEC61A1P61619 476 aaKnown RBP13.62□□□□□ -0.23
CPSF6-203ENST00000456847 PARP8Q8N3A8 854 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 ERGIC1Q969X5 290 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 OR10A2Q9H208 303 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 C7orf69Q9H7B7 122 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 FN3KRPQ9HA64 309 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 PPIAL4EA0A075B759 164 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 PPIAL4DF5H284 164 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 PPIAL4FP0DN26 164 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 ESRRGP62508 458 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 PTGES3Q15185 160 aaKnown RBP13.62□□□□□ -0.23
CPSF6-203ENST00000456847 KRTAP24-1Q3LI83 254 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 FAM201AQ5SY85 155 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 SLC16A9Q7RTY1 509 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 AMIGO2Q86SJ2 522 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 OR52H1Q8NGJ2 320 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 LAMP5Q9UJQ1 280 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 PPIAL4AQ9Y536 164 aa13.62□□□□□ -0.23
CPSF6-203ENST00000456847 A6NLC8 198 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 F5H0A9 414 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-203ENST00000456847 MITFO75030 526 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-203ENST00000456847 MRPL3P09001 348 aaKnown RBP13.61□□□□□ -0.23
CPSF6-203ENST00000456847 ADRA2CP18825 462 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 SLC2A5P22732 501 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 CFL1P23528 166 aaKnown RBP13.61□□□□□ -0.23
CPSF6-203ENST00000456847 ZFP36P26651 326 aaKnown RBP13.61□□□□□ -0.23
CPSF6-203ENST00000456847 DDOSTP39656 456 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 PMELP40967 661 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 MZT1Q08AG7 82 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 RHOUQ7L0Q8 258 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 C1QL2Q7Z5L3 287 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 KRT77Q7Z794 578 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 BOLLQ8N9W6 283 aaKnown RBP13.61□□□□□ -0.23
CPSF6-203ENST00000456847 OR8S1Q8NH09 359 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 SPSB4Q96A44 273 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 LRCH1Q9Y2L9 728 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 KLHDC2Q9Y2U9 406 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 CUBNO60494 3623 aa13.61□□□□□ -0.23
CPSF6-203ENST00000456847 WNK2Q9Y3S1 2297 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 AVPP01185 164 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 MPPED2Q15777 294 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 LRRN1Q6UXK5 716 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 SPERTQ8NA61 448 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 Q8TCH9 128 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 TMEM246Q9BRR3 403 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 SSBP3Q9BWW4 388 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-203ENST00000456847 TMEM165Q9HC07 324 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 C14orf119Q9NWQ9 140 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 MIOXQ9UGB7 285 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 ENOPH1Q9UHY7 261 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 GRPP07492 148 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 EPHA1P21709 976 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 GNB2P62879 340 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 FAM3AP98173 230 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 C1orf229Q6ZS94 237 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-203ENST00000456847 NLRC3Q7RTR2 1065 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 KLBQ86Z14 1044 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 C19orf18Q8NEA5 215 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 OR8B3Q8NGG8 313 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 NANPQ8TBE9 248 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 SGK3Q96BR1 496 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-203ENST00000456847 OR8B2Q96RD0 313 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 RNF7Q9UBF6 113 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 ATRQ13535 2644 aa13.6□□□□□ -0.23
CPSF6-203ENST00000456847 hCG_38984A0A1B0GV85 526 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms