RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173	PRF1	P14222	555 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	WNT3	P56703	355 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FAM26D	Q5JW98	314 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173		Q5PR19	223 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	LAMTOR1	Q6IAA8	161 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TMEM64	Q6YI46	380 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	WDR92	Q96MX6	357 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TEX101	Q9BY14	249 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SLCO1C1	Q9NYB5	712 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TRAPPC2L	Q9UL33	140 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	NUP205	Q92621	2012 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FCN1	O00602	326 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CIDEA	O60543	219 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	DUS4L	O95620	317 aa	Known RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FBL	P22087	321 aa	Known RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	NKAIN2	Q5VXU1	208 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZNF775	Q96BV0	537 aa	Predicted RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	MSI2	Q96DH6	328 aa	Known RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PIK3IP1	Q96FE7	263 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	C19orf43	Q9BQ61	176 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TMPRSS13	Q9BYE2	586 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	KCNK15	Q9H427	330 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	HEYL	Q9NQ87	328 aa	Predicted RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	DHCR7	Q9UBM7	475 aa	Known RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ACAD8	Q9UKU7	415 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZBTB42	B2RXF5	422 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZNF133	P52736	654 aa	Predicted RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	HMGA2	P52926	109 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FGF8	P55075	233 aa	Predicted RBP	11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TGFBR3	Q03167	851 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TIGIT	Q495A1	244 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZNF100	Q8IYN0	542 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	STARD4	Q96DR4	205 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SIGLEC11	Q96RL6	698 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PLEKHF2	Q9H8W4	249 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CUTC	Q9NTM9	273 aa		11.18	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZNF207	O43670	478 aa	Known RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	NDUFS6	O75380	124 aa	Known RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	DHODH	Q02127	395 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	MFAP5	Q13361	173 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	VWA1	Q6PCB0	445 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PARS2	Q7L3T8	475 aa	Known RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ARL6IP6	Q8N6S5	226 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TP53RK	Q96S44	253 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FAM234A	Q9H0X4	552 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SLCO1B1	Q9Y6L6	691 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZNF729	A6NN14	1252 aa	Predicted RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SFT2D2	O95562	160 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PTGER4	P35408	488 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	OR3A1	P47881	315 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PLGLB1	Q02325	96 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TGIF1	Q15583	401 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CYHR1	Q6ZMK1	362 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	OR2D3	Q8NGH3	330 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	OR2T10	Q8NGZ9	312 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	DOK5	Q9P104	306 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173		A0A1B0GTH9	108 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	LOC102723971	A0A1B0GUV8	181 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	OR10J4	P0C629	311 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	HOXB1	P14653	301 aa	Predicted RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CD82	P27701	267 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ZNF154	Q13106	437 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SLC43A2	Q8N370	569 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	GVQW1	Q8N7I0	195 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	MYOT	Q9UBF9	498 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	RNGTT	O60942	597 aa	Known RBP	11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ECH1	Q13011	328 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CATR1	Q13166	79 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	KIAA0040	Q15053	153 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FCRL6	Q6DN72	434 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	LAIR1	Q6GTX8	287 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ABHD17C	Q6PCB6	329 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	DNAJB11	Q9UBS4	358 aa		11.17	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TMEM272	A0A1B0GTI8	110 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	DTYMK	P23919	212 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CLN3	Q13286	438 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	RNASEK	Q6P5S7	137 aa	Known RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	C22orf15	Q8WYQ4	148 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	INSM2	Q96T92	566 aa	Predicted RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	BCL2L10	Q9HD36	194 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TNFSF18	Q9UNG2	199 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PIGL	Q9Y2B2	252 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TRAV36DV7	A0A075B6V5	113 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173		A0A1W2PR48	441 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	FAM24A	A6NFZ4	105 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ICOSLG	O75144	302 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SOD2	P04179	222 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CDX1	P47902	265 aa	Predicted RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	ERVFC1-1	P60608	527 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	MRPL49	Q13405	166 aa	Known RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	PWWP2B	Q6NUJ5	590 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	OR5C1	Q8NGR4	320 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SDHC	Q99643	169 aa	Predicted RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	SLC17A9	Q9BYT1	436 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	CPEB1	Q9BZB8	566 aa	Known RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	GPR34	Q9UPC5	381 aa		11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	EXOG	Q9Y2C4	368 aa	Known RBP	11.16	□□□□□ -0.62
NEDD4L-208	ENST00000456173	TMED7	Q9Y3B3	224 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms