RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SPACA1Q9HBV2 294 aa12.21□□□□□ -0.46
PTPRE-204ENST00000455661 CENPMQ9NSP4 180 aa12.21□□□□□ -0.46
PTPRE-204ENST00000455661 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.46
PTPRE-204ENST00000455661 FIGNL2A6NMB9 653 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 SYT7O43581 403 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 OR3A2P47893 321 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 IL15RAQ13261 267 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 TGIF1Q15583 401 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 GUK1Q16774 197 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 DNM1P34Q6PK57 102 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 FAM24BQ8N5W8 94 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 IP6K3Q96PC2 410 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 EIF5A2Q9GZV4 153 aaKnown RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 FAM60AQ9NP50 221 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 A0A0C4DFX4 3053 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 PMS2P1A4D2B8 440 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF729A6NN14 1252 aaPredicted RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 PRAMEF26H0Y7S4 382 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 H0Y8X5 98 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 DXOO77932 396 aaKnown RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 CTSBP07858 339 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 GP1BBP13224 206 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 FCGR2CP31995 323 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF93P35789 620 aaPredicted RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 SNCAP37840 140 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 OR2B8PP59922 312 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF117Q03924 483 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 RHEBQ15382 184 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 PEG10Q86TG7 708 aaKnown RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 LINC00346Q8IVM7 164 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 C12orf76Q8N812 135 aaPredicted RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF775Q96BV0 537 aaPredicted RBP12.2□□□□□ -0.46
PTPRE-204ENST00000455661 KLHDC3Q9BQ90 382 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 NICN1Q9BSH3 213 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 CNTNAP3Q9BZ76 1288 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 ANAPC10Q9UM13 185 aa12.2□□□□□ -0.46
PTPRE-204ENST00000455661 C17orf105B2RV13 164 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 DAOP14920 347 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 AMY2BP19961 511 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 SEC13P55735 322 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 NOGQ13253 232 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 KLHL24Q6TFL4 600 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF248Q8NDW4 579 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 OR1J1Q8NGS3 322 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ADOQ96SZ5 270 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 PFDN5Q99471 154 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 C20orf24Q9BUV8 137 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 TOLLIPQ9H0E2 274 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 FBXL17Q9UF56 701 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ALPK2Q86TB3 2170 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 LOC101059948A0A1B0GTJ6 334 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 MPIG6BO95866 241 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 IGHMP01871 453 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 CLPSP04118 112 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 POU2F2P09086 479 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
PTPRE-204ENST00000455661 PGCP20142 388 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 SULT1A1P50225 295 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 MMP16P51512 607 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 PPP1CAP62136 330 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 TOMM34Q15785 309 aaPredicted RBP12.19□□□□□ -0.46
PTPRE-204ENST00000455661 FAM189A2Q15884 450 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 MIDNQ504T8 468 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 OR2A2Q6IF42 318 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 HIST2H3AQ71DI3 136 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ARHGEF39Q8N4T4 335 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF565Q8N9K5 539 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 SLC26A10Q8NG04 563 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 OR13C9Q8NGT0 318 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ST7LQ8TDW4 575 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 ADAT3Q96EY9 351 aaPredicted RBP12.19□□□□□ -0.46
PTPRE-204ENST00000455661 GGACTQ9BVM4 153 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 NXF5Q9H1B4 397 aaKnown RBP12.19□□□□□ -0.46
PTPRE-204ENST00000455661 LPAR5Q9H1C0 372 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 LMAN1LQ9HAT1 526 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 CLDN16Q9Y5I7 305 aa12.19□□□□□ -0.46
PTPRE-204ENST00000455661 RHPN2P1A8MT19 583 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 UMAD1C9J7I0 102 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF217O75362 1048 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF708P17019 499 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 RBMXP38159 391 aaKnown RBP12.18□□□□□ -0.46
PTPRE-204ENST00000455661 HTR5AP47898 357 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 P2RY4P51582 365 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 HSD17B7P56937 341 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 RAB1AP62820 205 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF616Q08AN1 781 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 GPM6BQ13491 265 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 IAH1Q2TAA2 248 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms