RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 C1orf87Q8N0U7 546 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 OR56B2PQ8NGI1 322 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 ERGIC1Q969X5 290 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 SLC25A28Q96A46 364 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 TMIGD2Q96BF3 282 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 SEH1LQ96EE3 360 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 MARCH7Q9H992 704 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 RNF7Q9UBF6 113 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
GPC1-206ENST00000455111 PRKDCP78527 4128 aaKnown RBP13.28□□□□□ -0.28
GPC1-206ENST00000455111 IGHV3OR15-7A0A075B7D8 119 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 FAM181BA6NEQ2 426 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 SRRM5B3KS81 715 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 MELTFP08582 738 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 SAMD4BQ5PRF9 694 aaKnown RBP13.27□□□□□ -0.29
GPC1-206ENST00000455111 RASSF6Q6ZTQ3 369 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 DEFB107AQ8IZN7 70 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 LNX2Q8N448 690 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 BOLLQ8N9W6 283 aaKnown RBP13.27□□□□□ -0.29
GPC1-206ENST00000455111 PROKR2Q8NFJ6 384 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 SPRYD4Q8WW59 207 aaPredicted RBP13.27□□□□□ -0.29
GPC1-206ENST00000455111 SPSB4Q96A44 273 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 SLAMF6Q96DU3 332 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 PLEKHA8Q96JA3 519 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 PCGF1Q9BSM1 259 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 CHIAQ9BZP6 476 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 FGF23Q9GZV9 251 aaPredicted RBP13.27□□□□□ -0.29
GPC1-206ENST00000455111 NSRP1Q9H0G5 558 aaKnown RBP13.27□□□□□ -0.29
GPC1-206ENST00000455111 TNFRSF19Q9NS68 423 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 C1orf123Q9NWV4 160 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 C1RLQ9NZP8 487 aa13.27□□□□□ -0.29
GPC1-206ENST00000455111 ZNF879B4DU55 563 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 TNFRSF11BO00300 401 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 GMDSO60547 372 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 SOX14O95416 240 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 GYPAP02724 150 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 VWFP04275 2813 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 ZNF823P16415 610 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 SPI1P17947 270 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 MTNR1AP48039 350 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 IL13RA1P78552 427 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 FAM3AP98173 230 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 MS4A2Q01362 244 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 MALLQ13021 153 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 HSP90B2PQ58FF3 399 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 TEX36Q5VZQ5 186 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 DRAM2Q6UX65 266 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 SPATC1Q76KD6 591 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 NLRC3Q7RTR2 1065 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 PIGWQ7Z7B1 504 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 OR11L1Q8NGX0 322 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 SGK3Q96BR1 496 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 TECTBQ96PL2 329 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 KCNJ15Q99712 375 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 TRIM15Q9C019 465 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 SLITRK2Q9H156 845 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 MED20Q9H944 212 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 MRPL15Q9P015 296 aaKnown RBP13.26□□□□□ -0.29
GPC1-206ENST00000455111 PDP1Q9P0J1 537 aaPredicted RBP13.26□□□□□ -0.29
GPC1-206ENST00000455111 TAGLN3Q9UI15 199 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 MMP24Q9Y5R2 645 aa13.26□□□□□ -0.29
GPC1-206ENST00000455111 DHRS12A0PJE2 317 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 OOEPA6NGQ2 149 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 ZNF593O00488 134 aaPredicted RBP13.25□□□□□ -0.29
GPC1-206ENST00000455111 ADAM20O43506 726 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
GPC1-206ENST00000455111 TFF1P04155 84 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 GRPP07492 148 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 SPARCP09486 303 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 IRF2P14316 349 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 ENTPD1P49961 510 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 DLX1P56177 255 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 CSNK2BP67870 215 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
GPC1-206ENST00000455111 TEX30Q5JUR7 227 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 FIP1L1Q6UN15 594 aaKnown RBP13.25□□□□□ -0.29
GPC1-206ENST00000455111 TREML4Q6UXN2 200 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 RHOUQ7L0Q8 258 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 OR2T4Q8NH00 348 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 WFDC12Q8WWY7 111 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 SPTSSAQ969W0 71 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 MCUR1Q96AQ8 359 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 TSSK6Q9BXA6 273 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 MMADHCQ9H3L0 296 aaPredicted RBP13.25□□□□□ -0.29
GPC1-206ENST00000455111 FN3KRPQ9HA64 309 aa13.25□□□□□ -0.29
GPC1-206ENST00000455111 hCG_38984A0A1B0GV85 526 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 GGT3PA6NGU5 568 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 DVL1O14640 695 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 GMNNO75496 209 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 IFNGR2P38484 337 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 SLC25A1P53007 311 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 SLC16A9Q7RTY1 509 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 TMEM179BQ7Z7N9 219 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 PLPP7Q8NBV4 271 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms