RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 IER3P46695 156 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 OMPP47874 163 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 PROK1P58294 105 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 SRSF4Q08170 494 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CDONQ4KMG0 1287 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 RUSC1-AS1Q66K80 236 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 DHRS7BQ6IAN0 325 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ASPHD2Q6ICH7 369 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 C11orf88Q6PI97 169 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CORO6Q6QEF8 472 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 METAP1DQ6UB28 335 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 PTCHD4Q6ZW05 846 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 RHOUQ7L0Q8 258 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 HDXQ7Z353 690 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 TSEN54Q7Z6J9 526 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 GALNT4Q8N4A0 578 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 DTX3Q8N9I9 347 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 BOLLQ8N9W6 283 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ZSCAN4Q8NAM6 433 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 OR5R1Q8NH85 324 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 LINC01006Q8NI28 216 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 RP9Q8TA86 221 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 FANK1Q8TC84 345 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 TAF15Q92804 592 aaKnown RBP eCLIP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 LHX4Q969G2 390 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 FAM162AQ96A26 154 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 SLCO4A1Q96BD0 722 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNF799Q96GE5 643 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ERMAPQ96PL5 475 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 SIRPDQ9H106 197 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 C16orf95Q9H693 158 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 WDR76Q9H967 626 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 VIPAS39Q9H9C1 493 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 FRRS1LQ9P0K9 344 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 KAAG1Q9UBP8 84 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CYB5R1Q9UHQ9 305 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 SAMD4AQ9UPU9 718 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNF281Q9Y2X9 895 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 TET2Q6N021 2002 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 VWFP04275 2813 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 hCG_1807616A0A1W2PRN6 198 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 TIPRLO75663 272 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 IGHV4-59P01825 116 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 CSF1P09603 554 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 MUC1P15941 1255 aaPredicted RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 TGFBR2P37173 567 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 SLC7A2P52569 658 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 MPPED2Q15777 294 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 SNCBQ16143 134 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 MEP1BQ16820 701 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 MICBQ29980 383 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RSPO1Q2MKA7 263 aaPredicted RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RFX4Q33E94 735 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 PRAMEF6Q5VXH4 476 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 SFRP4Q6FHJ7 346 aaPredicted RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 DRAM2Q6UX65 266 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 CFAP77Q6ZQR2 320 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 BTN2A1Q7KYR7 527 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 SLC36A1Q7Z2H8 476 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 ZBTB46Q86UZ6 589 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 SLC15A3Q8IY34 581 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 OR6V1Q8N148 313 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 OR8S1Q8NH09 359 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 C12orf43Q96C57 262 aaKnown RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RCN3Q96D15 328 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 NMNAT3Q96T66 252 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 KCTD14Q9BQ13 255 aaPredicted RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RSRP1Q9BUV0 290 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 IFT27Q9BW83 186 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 SP140LQ9H930 580 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 EFCAB1Q9HAE3 211 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RNPEPL1Q9HAU8 725 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RPRD1BQ9NQG5 326 aaKnown RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 C1orf123Q9NWV4 160 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 CMTM6Q9NX76 183 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 NDUFAF4Q9P032 175 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 CTSZQ9UBR2 303 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 RPUSD1Q9UJJ7 312 aaKnown RBP6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
NIF3L1-209ENST00000454952 A0A0U1RQK1 487 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 ANKRD30BLA7E2S9 258 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 DCTN6O00399 190 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 BHLHE40O14503 412 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 DVL1O14640 695 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 XRCC2O43543 280 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 CCDC22O60826 627 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 TSPAN9O75954 239 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 PAHP00439 452 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 GYPAP02724 150 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 FUT4P22083 530 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 CFL1P23528 166 aaKnown RBP6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 NAA10P41227 235 aaPredicted RBP6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 ARF6P62330 175 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 TAF13Q15543 124 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 TEX36Q5VZQ5 186 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 OTPQ5XKR4 325 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 NCR3LG1Q68D85 454 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 RPL13AP3Q6NVV1 102 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms