RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 RPS2P15880 293 aaKnown RBP10.08□□□□□ -0.8
USP40-210ENST00000454354 CA6P23280 308 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 GSTT1P30711 240 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 OPRL1P41146 370 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 CX3CR1P49238 355 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 CDK5Q00535 292 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 ZNF154Q13106 437 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 GINS1Q14691 196 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 TAF13Q15543 124 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 OR8G1Q15617 311 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 PRAMEF6Q5VXH4 476 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 PRSS45Q7RTY3 260 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 PLPP7Q8NBV4 271 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 OR6N2Q8NGY6 317 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 DACT3Q96B18 629 aaPredicted RBP10.08□□□□□ -0.8
USP40-210ENST00000454354 NRBF2Q96F24 287 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 ABHD6Q9BV23 337 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 ZNF556Q9HAH1 456 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 SLC25A19Q9HC21 320 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 CENPMQ9NSP4 180 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 OR5V1Q9UGF6 321 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 PPIAL4AQ9Y536 164 aa10.08□□□□□ -0.8
USP40-210ENST00000454354 FAM20BO75063 409 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 ZNF205O95201 554 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 APOC1P02654 83 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 HMGN1P05114 100 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 IRF2P14316 349 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 POU1F1P28069 291 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 HSD11B1P28845 292 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 DDOSTP39656 456 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 BNIP1Q12981 228 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 MPPED2Q15777 294 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 DCDC5Q6ZRR9 648 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 SPATC1Q76KD6 591 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.07□□□□□ -0.8
USP40-210ENST00000454354 SPERTQ8NA61 448 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 OR56B2PQ8NGI1 322 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 OR11L1Q8NGX0 322 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 DNAJC9Q8WXX5 260 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 DVL3Q92997 716 aaPredicted RBP10.07□□□□□ -0.8
USP40-210ENST00000454354 ZMYND19Q96E35 227 aaPredicted RBP10.07□□□□□ -0.8
USP40-210ENST00000454354 NEIL1Q96FI4 390 aaPredicted RBP10.07□□□□□ -0.8
USP40-210ENST00000454354 AMELYQ99218 206 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 SSBP3Q9BWW4 388 aaPredicted RBP10.07□□□□□ -0.8
USP40-210ENST00000454354 SUCNR1Q9BXA5 334 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 CADM1Q9BY67 442 aaKnown RBP10.07□□□□□ -0.8
USP40-210ENST00000454354 SP140LQ9H930 580 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 NTN4Q9HB63 628 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
USP40-210ENST00000454354 hCG_38984A0A1B0GV85 526 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PHYHO14832 338 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 GSC2O15499 205 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 LYNP07948 512 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PPIAL4GP0DN37 164 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PRKACGP22612 351 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 SLC2A5P22732 501 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PSMB10P40306 273 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 FAM3AP98173 230 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PAX8Q06710 450 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 SLC35D3Q5M8T2 416 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 FAM201AQ5SY85 155 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PLBD1Q6P4A8 553 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 FAHD1Q6P587 224 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 NLRC3Q7RTR2 1065 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 SLC16A9Q7RTY1 509 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PARP8Q8N3A8 854 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 OR8B3Q8NGG8 313 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 OR52H1Q8NGJ2 320 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 OTOSQ8NHW6 89 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
USP40-210ENST00000454354 OTULINQ96BN8 352 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 PLEKHA8Q96JA3 519 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 OR8B2Q96RD0 313 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 JMJD8Q96S16 334 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 SLC6A7Q99884 636 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 MRI1Q9BV20 369 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 OR51V1Q9H2C8 321 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 FN3KRPQ9HA64 309 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 UFSP2Q9NUQ7 469 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 RNF7Q9UBF6 113 aa10.06□□□□□ -0.8
USP40-210ENST00000454354 IGHV2-70DA0A0C4DH43 119 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
USP40-210ENST00000454354 TBX1O43435 398 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 SELENOFO60613 162 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 ANXA2P07355 339 aaKnown RBP10.05□□□□□ -0.8
USP40-210ENST00000454354 CFL1P23528 166 aaKnown RBP10.05□□□□□ -0.8
USP40-210ENST00000454354 PITPNBP48739 271 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 ZNF121P58317 390 aaPredicted RBP10.05□□□□□ -0.8
USP40-210ENST00000454354 GNB2P62879 340 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 OR8B8Q15620 311 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 TIGD6Q17RP2 521 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 KLHL12Q53G59 568 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 ARMCX4Q5H9R4 360 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 KLF17Q5JT82 389 aaPredicted RBP10.05□□□□□ -0.8
USP40-210ENST00000454354 LRRN1Q6UXK5 716 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 CPOQ8IVL8 374 aa10.05□□□□□ -0.8
USP40-210ENST00000454354 BPIFB2Q8N4F0 458 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms