RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 COL8A2P25067 703 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 ACTC1P68032 377 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 ACTA1P68133 377 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 FAM3AP98173 230 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 SMN1Q16637 294 aaKnown RBP23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 ZNF829Q3KNS6 432 aaPredicted RBP23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 CIARTQ8N365 385 aaPredicted RBP23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 OR2Z1Q8NG97 314 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 CNIH3Q8TBE1 160 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 SPRYD4Q8WW59 207 aaPredicted RBP23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 TANC2Q9HCD6 1990 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 F8P00451 2351 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 GGT3PA6NGU5 568 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 METTL15A6NJ78 407 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 VWC2LB2RUY7 222 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 H7C1Q1 480 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 GIFP27352 417 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 AQP4P55087 323 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 RAB40BQ12829 278 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 ACBD7Q8N6N7 88 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 YIPF5Q969M3 257 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 ELMOD3Q96FG2 381 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 SAP30LQ9HAJ7 183 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 TMEM100Q9NV29 134 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 ZNF391Q9UJN7 358 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 R4GMQ9 66 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 CR1P17927 2039 aa23.76■■□□□ 1.39
SMARCC1-203ENST00000454240 hCG_38984A0A1B0GV85 526 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 TPD52L2O43399 206 aaKnown RBP23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 DDOSTP39656 456 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 CRYBB2P43320 205 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 TNFAIP6P98066 277 aaPredicted RBP23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 MFGE8Q08431 387 aaPredicted RBP23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 CARTPTQ16568 116 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 SPRNQ5BIV9 151 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 LIPNQ5VXI9 398 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 PLEKHG7Q6ZR37 379 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 C8orf59Q8N0T1 100 aaPredicted RBP23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 YIPF7Q8N8F6 280 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 LYZL4Q96KX0 146 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 REG4Q9BYZ8 158 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 EGLN1Q9GZT9 426 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 PBOV1Q9GZY1 135 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 VCX3BQ9H321 246 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 IL19Q9UHD0 177 aa23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 NUFIP1Q9UHK0 495 aaKnown RBP23.75■■□□□ 1.39
SMARCC1-203ENST00000454240 A0A0U1RQV5 110 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 DAPL1A0PJW8 107 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 RNF223E7ERA6 249 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 H0YL77 283 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 MLNRO43193 412 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 RP2O75695 350 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 FADS2O95864 444 aaKnown RBP23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 FOSL1P15407 271 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 SLC25A16P16260 332 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 ACHEP22303 614 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 TNFSF4P23510 183 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 RIN1Q13671 783 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 GFOD2Q3B7J2 385 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 KLHL22Q53GT1 634 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 OR56B2PQ8NGI1 322 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 FBLIM1Q8WUP2 373 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 C18orf12Q96KH6 178 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 COX4I2Q96KJ9 171 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 SIGLEC11Q96RL6 698 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 PIMREGQ9BSJ6 248 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 CHODLQ9H9P2 273 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 G6PC2Q9NQR9 355 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 MYRFQ9Y2G1 1151 aa23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 RRP15Q9Y3B9 282 aaKnown RBP23.74■■□□□ 1.39
SMARCC1-203ENST00000454240 DYSFO75923 2080 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 A0A096LNT2 108 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 IGHV1-69-2A0A0G2JMI3 117 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 IGLV3-1P01715 115 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 IGHA1P01876 353 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 GSK3AP49840 483 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 CDONQ4KMG0 1287 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 OR52I1Q8NGK6 324 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 PPP1R14AQ96A00 147 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 SLC22A4Q9H015 551 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 MOB1AQ9H8S9 216 aa23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 MRPL15Q9P015 296 aaKnown RBP23.73■■□□□ 1.39
SMARCC1-203ENST00000454240 YLPM1P49750 1951 aaKnown RBP23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 ACANP16112 2415 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 LOC110117498-PIK3R3F6TDL0 507 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 CDC14BO60729 498 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 NR4A2P43354 598 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 OR8B8Q15620 311 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 C6orf52Q5T4I8 152 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 KCTD20Q7Z5Y7 419 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 ZNF540Q8NDQ6 660 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 OR10AD1Q8NGE0 317 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 ZNF649Q9BS31 505 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 FGF20Q9NP95 211 aaPredicted RBP23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 OR52A1Q9UKL2 312 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 SNX5Q9Y5X3 404 aa23.72■■□□□ 1.39
SMARCC1-203ENST00000454240 FAM20BO75063 409 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 RPP14O95059 124 aaKnown RBP23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 TTRP02766 147 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 HLA-DPB1P04440 258 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms