RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 INPP5EQ9NRR6 644 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 FAIMQ9NVQ4 179 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 SCN3BQ9NY72 215 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 GNG8Q9UK08 70 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 R4GMQ9 66 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 A0A1B0GTI1 187 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 RNF223E7ERA6 249 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 IFNA2P01563 188 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 IGLV3-1P01715 115 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 TTRP02766 147 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 KRT8P05787 483 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 ANXA2P07355 339 aaKnown RBP13.38□□□□□ -0.27
VCX3B-204ENST00000453306 APOBEC3AP31941 199 aaPredicted RBP13.38□□□□□ -0.27
VCX3B-204ENST00000453306 TTKP33981 857 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 SERPINF1P36955 418 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 MAP2K4P45985 399 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 GK2Q14410 553 aaPredicted RBP13.38□□□□□ -0.27
VCX3B-204ENST00000453306 SWI5Q1ZZU3 235 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 RNLSQ5VYX0 342 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 C11orf71Q6IPW1 123 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 CATSPERDQ86XM0 798 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 SYS1Q8N2H4 156 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 NANOGP1Q8N7R0 232 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 GATAD2BQ8WXI9 593 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 MRPL24Q96A35 216 aaKnown RBP13.38□□□□□ -0.27
VCX3B-204ENST00000453306 SPSB4Q96A44 273 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 HAVCR1Q96D42 359 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 OR5M11Q96RB7 305 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 SYT3Q9BQG1 590 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 REG4Q9BYZ8 158 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 BCL2L14Q9BZR8 327 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 PBOV1Q9GZY1 135 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 NIPAL2Q9H841 368 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 FRRS1LQ9P0K9 344 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
VCX3B-204ENST00000453306 EXOSC1Q9Y3B2 195 aaKnown RBP13.38□□□□□ -0.27
VCX3B-204ENST00000453306 TPRKBQ9Y3C4 175 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 TLN2Q9Y4G6 2542 aa13.38□□□□□ -0.27
VCX3B-204ENST00000453306 IGLV3-9A0A075B6K5 115 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 IRGMA1A4Y4 181 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 RGS6P49758 472 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 WDR38Q5JTN6 314 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 MBNL2Q5VZF2 373 aaKnown RBP13.37□□□□□ -0.27
VCX3B-204ENST00000453306 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
VCX3B-204ENST00000453306 FDX2Q6P4F2 183 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 FBXW12Q6X9E4 464 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 KCTD20Q7Z5Y7 419 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 DTX2Q86UW9 622 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 OR2G2Q8NGZ5 317 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 IPCEF1Q8WWN9 437 aaPredicted RBP13.37□□□□□ -0.27
VCX3B-204ENST00000453306 PGAM5Q96HS1 289 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 PPP1R3EQ9H7J1 279 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 OR52A1Q9UKL2 312 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 CAB39Q9Y376 341 aaPredicted RBP13.37□□□□□ -0.27
VCX3B-204ENST00000453306 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 SPEF1Q9Y4P9 236 aa13.37□□□□□ -0.27
VCX3B-204ENST00000453306 OR4C45A6NMZ5 311 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 LOC110117498-PIK3R3F6TDL0 507 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 IGHV3-13P01766 116 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 FAM3AP98173 230 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 EFNB3Q15768 340 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 OR2T2Q6IF00 324 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 ZNF544Q6NX49 715 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 Q6ZR03 302 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 KLBQ86Z14 1044 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 ELMOD2Q8IZ81 293 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 ZCCHC24Q8N2G6 241 aaKnown RBP13.36□□□□□ -0.27
VCX3B-204ENST00000453306 OR52N1Q8NH53 320 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 SYNPRQ8TBG9 265 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 RPS4Y2Q8TD47 263 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 TRAF4Q9BUZ4 470 aaPredicted RBP13.36□□□□□ -0.27
VCX3B-204ENST00000453306 YTHDF1Q9BYJ9 559 aaKnown RBP13.36□□□□□ -0.27
VCX3B-204ENST00000453306 PLK3Q9H4B4 646 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 NUFIP1Q9UHK0 495 aaKnown RBP13.36□□□□□ -0.27
VCX3B-204ENST00000453306 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 ATRQ13535 2644 aa13.36□□□□□ -0.27
VCX3B-204ENST00000453306 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ACOD1A6NK06 481 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 J3QW42 95 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 TBX1O43435 398 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 RGS10O43665 173 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 LMX1BO60663 402 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ACKR3P25106 362 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 CDKN1AP38936 164 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ALDH3B1P43353 468 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ACTA2P62736 377 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ACTG2P63267 376 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ZNF718Q3SXZ3 478 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ARL9Q6T311 187 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 PRSS48Q7RTY5 328 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 MUC15Q8N387 334 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 KLHL36Q8N4N3 616 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 ZFP41Q8N8Y5 198 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 MAPK1IP1LQ8NDC0 245 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 OR10AC1Q8NH08 325 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 OR51E1Q8TCB6 317 aa13.35□□□□□ -0.27
VCX3B-204ENST00000453306 BABAM2Q9NXR7 383 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms