RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 TBPL2Q6SJ96 375 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 SMARCD3Q6STE5 483 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 DRAM2Q6UX65 266 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 CFAP77Q6ZQR2 320 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 VTCN1Q7Z7D3 282 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 ST8SIA4Q92187 359 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 FAM46AQ96IP4 442 aaKnown RBP11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 RSRC1Q96IZ7 334 aaKnown RBP11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 ATP6V1G3Q96LB4 118 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 B9D1Q9UPM9 204 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 A0A0G2JND7 137 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 hCG_1807616A0A1W2PRN6 198 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 GGT3PA6NGU5 568 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 A6NLC8 198 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 BHLHE40O14503 412 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 EDF1O60869 148 aaKnown RBP11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 GYPAP02724 150 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 KIR2DS4P43632 304 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 EFNB2P52799 333 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 LOXL3P58215 753 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 FAM189A2Q15884 450 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 MEP1BQ16820 701 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 OTPQ5XKR4 325 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC35E4Q6ICL7 350 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 LIAT1Q6ZQX7 453 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 FKBP9P1Q75LS8 142 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 CBLL1Q75N03 491 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 OR6V1Q8N148 313 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 BOLLQ8N9W6 283 aaKnown RBP11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 PNRC2Q9NPJ4 139 aaKnown RBP11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 ONECUT1Q9UBC0 465 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 ENPP4Q9Y6X5 453 aa11.73□□□□□ -0.53
LYSMD3-202ENST00000453259 M0R1W7 72 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 DCTN6O00399 190 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 IDH3BO43837 385 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 ZNF682O95780 498 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 H1F0P07305 194 aaKnown RBP11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC6A6P31641 620 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 NAA10P41227 235 aaPredicted RBP11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 OMPP47874 163 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 UBE2E1P51965 193 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 PRSS12P56730 875 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 RFX4Q33E94 735 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 LRRC10Q5BKY1 277 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 ATPAF1Q5TC12 328 aaPredicted RBP11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 OR4S1Q8NGB4 309 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 OR2T6Q8NHC8 308 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 TSSK2Q96PF2 358 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 TMEM120AQ9BXJ8 343 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 METTL8Q9H825 291 aaKnown RBP11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 NECAP2Q9NVZ3 263 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 FAM32AQ9Y421 112 aaKnown RBP11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 MAB21L2Q9Y586 359 aa11.72□□□□□ -0.53
LYSMD3-202ENST00000453259 UNC119BA6NIH7 251 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 NDUFAB1O14561 156 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC22A2O15244 555 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 XRCC2O43543 280 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 NDUFB3O43676 98 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 FCN3O75636 299 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 TROVE2P10155 538 aaKnown RBP eCLIP11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 RHCEP18577 417 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 SAA4P35542 130 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 FXYD6P3P58550 94 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 ZNF92Q03936 586 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 SNCBQ16143 134 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 PCK2Q16822 640 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 PGBD2Q6P3X8 592 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 PDZD9Q8IXQ8 264 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 MRAPQ8TCY5 172 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 HSH2DQ96JZ2 352 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 ERMAPQ96PL5 475 aaPredicted RBP11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 RASSF4Q9H2L5 321 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 PPA2Q9H2U2 334 aa11.71□□□□□ -0.53
LYSMD3-202ENST00000453259 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
LYSMD3-202ENST00000453259 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 CXCR6O00574 342 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 HLA-DQA2P01906 255 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 GRPP07492 148 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 ZNF823P16415 610 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 EMX1Q04741 257 aaPredicted RBP11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 KLF10Q13118 480 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 BLMHQ13867 455 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 FGD3Q5JSP0 725 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 NAA40Q86UY6 237 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 LINC00346Q8IVM7 164 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 FTMTQ8N4E7 242 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 CYB561A3Q8NBI2 242 aa11.7□□□□□ -0.54
LYSMD3-202ENST00000453259 OR8S1Q8NH09 359 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms