RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CD200R1Q8TD46 325 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ADAMTS16Q8TE57 1224 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CA5BP1Q8WTZ4 195 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 EEF1AKMT1Q8WVE0 214 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 MS4A14Q96JA4 679 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF597Q96LX8 424 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 TSNARE1Q96NA8 513 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 SIGLEC12Q96PQ1 595 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 AIF1LQ9BQI0 150 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CHCHD5Q9BSY4 110 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 EXO5Q9H790 373 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ASIC3Q9UHC3 531 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 KLF13Q9Y2Y9 288 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CSDC2Q9Y534 153 aaKnown RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 SLC22A7Q9Y694 548 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 HCFC1P51610 2035 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 LRRK2Q5S007 2527 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 USP9XQ93008 2570 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ARHGAP21Q5T5U3 1957 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 LRBAP50851 2863 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 RP1L1Q8IWN7 2480 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 PPIAL4EA0A075B759 164 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 ARPC4-TTLL3A0A0A6YYG9 625 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TRBV11-1A0A0K0K1C0 115 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 FOXI3A8MTJ6 420 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 KIF2AO00139 706 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CHST10O43529 356 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 GALR3O60755 368 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CTAG2O75638 210 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 MYO1DO94832 1006 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 PPIAL4FP0DN26 164 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CDKN2DP55273 166 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 RND3P61587 244 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 STXBP1P61764 594 aaKnown RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 VLDLRP98155 873 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 PLGLB1Q02325 96 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CYLC2Q14093 348 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 KCTD19Q17RG1 926 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TRIM16LQ309B1 348 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 DEFB134Q4QY38 66 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 XKR7Q5GH72 579 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 MEDAGQ5VYS4 303 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 SLC25A25Q6KCM7 469 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CYHR1Q6ZMK1 362 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 MBOAT1Q6ZNC8 495 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 H2BFWTQ7Z2G1 175 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 RPS19BP1Q86WX3 136 aaKnown RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 LRRC8AQ8IWT6 810 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 OFCC1Q8IZS5 231 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 PDIK1LQ8N165 341 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CYP4Z2PQ8N1L4 340 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 MDS2Q8NDY4 140 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 FAM83FQ8NEG4 500 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TTLQ8NG68 377 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 OR5T3Q8NGG3 340 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 SLC22A8Q8TCC7 542 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 NT5CQ8TCD5 201 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 MAGEE2Q8TD90 523 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 AGAP11Q8TF27 550 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 GTF3AQ92664 365 aaKnown RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF75CPQ92670 426 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TSLPQ969D9 159 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 UBE2E3Q969T4 207 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TM4SF19Q96DZ7 209 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CERS2Q96G23 380 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 SNF8Q96H20 258 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 TECTBQ96PL2 329 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 CENPKQ9BS16 269 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 NIPSNAP3BQ9BS92 247 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 HCAR1Q9BXC0 346 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 HES7Q9BYE0 225 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 DEFB126Q9BYW3 111 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 EXOSC3Q9NQT5 275 aaKnown RBP3.41□□□□□ -1.86
LINC00393-202ENST00000452852 ABCG2Q9UNQ0 655 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 PPIAL4AQ9Y536 164 aa3.41□□□□□ -1.86
LINC00393-202ENST00000452852 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 A0A1B0GTH9 108 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 A8MUA0 341 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 SOCS3O14543 225 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 CDH16O75309 829 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 CLDN9O95484 217 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 IFNA16P05015 189 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 SERPINA6P08185 405 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 SERPINA2P20848 420 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 MAGEA3P43357 314 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 SSR4P51571 173 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 ARHGDIBP52566 201 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 EFNA3P52797 238 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 RIPPLY3P57055 190 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 MLF1P58340 268 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 RAB8AP61006 207 aa3.4□□□□□ -1.87
LINC00393-202ENST00000452852 BTN3A2P78410 334 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms