RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 UFSP2Q9NUQ7 469 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 NUP50Q9UKX7 468 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 IGHV2-70DA0A0C4DH43 119 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 GGT3PA6NGU5 568 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 H3BN98 237 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 XRCC2O43543 280 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 PPIAL4GP0DN37 164 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 IRF2P14316 349 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 FPR2P25090 351 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 PSMB10P40306 273 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 PITPNBP48739 271 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 GNB2P62879 340 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 GRB2P62993 217 aaKnown RBP10.41□□□□□ -0.74
CPSF4-208ENST00000452047 ACTG1P63261 375 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 EIF2B1Q14232 305 aaKnown RBP10.41□□□□□ -0.74
CPSF4-208ENST00000452047 TAF13Q15543 124 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 LYPD2Q6UXB3 125 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF841Q6ZN19 808 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 DCDC5Q6ZRR9 648 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 SPATC1Q76KD6 591 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 PRSS45Q7RTY3 260 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 TRPM8Q7Z2W7 1104 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 DPY19L4Q7Z388 723 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 ERI1Q8IV48 349 aaKnown RBP10.41□□□□□ -0.74
CPSF4-208ENST00000452047 TIGD4Q8IY51 512 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 HS3ST5Q8IZT8 346 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 PLPP7Q8NBV4 271 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 C19orf18Q8NEA5 215 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 OR8B3Q8NGG8 313 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 OR11L1Q8NGX0 322 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 OR6N2Q8NGY6 317 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 RNF133Q8WVZ7 376 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 PLEKHA8Q96JA3 519 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 OR8B2Q96RD0 313 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 INTS14Q96SY0 518 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 AMELYQ99218 206 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 ABHD6Q9BV23 337 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 TOR3AQ9H497 397 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF69Q9UC07 566 aa10.41□□□□□ -0.74
CPSF4-208ENST00000452047 TMEM89A2RUT3 159 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 PHYHO14832 338 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 GLCEO94923 617 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 HOXB6P17509 224 aaKnown RBP10.4□□□□□ -0.74
CPSF4-208ENST00000452047 CFPP27918 469 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 GSTT1P30711 240 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 OPRL1P41146 370 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 SLC15A1P46059 708 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 CX3CR1P49238 355 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 UBA52P62987 128 aaKnown RBP10.4□□□□□ -0.74
CPSF4-208ENST00000452047 C12orf54Q6X4T0 127 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 RHOUQ7L0Q8 258 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 DOK3Q7L591 496 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 NLRC3Q7RTR2 1065 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 SLC16A9Q7RTY1 509 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 BCL6BQ8N143 479 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-208ENST00000452047 SIGLECL1Q8N7X8 197 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 RAB40AQ8WXH6 277 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 UPRTQ96BW1 309 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 SLC7A6OSQ96CW6 309 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-208ENST00000452047 FN3KRPQ9HA64 309 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 NTN4Q9HB63 628 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 PDP1Q9P0J1 537 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-208ENST00000452047 RNF7Q9UBF6 113 aa10.4□□□□□ -0.74
CPSF4-208ENST00000452047 KIR2DS1A0A191URI9 304 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 hCG_38984A0A1B0GV85 526 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 TCRBV3S1A0A5B6 114 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 ANXA2P07355 339 aaKnown RBP10.39□□□□□ -0.75
CPSF4-208ENST00000452047 IGHV4-38-2P0DP08 117 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 OSMP13725 252 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 HSD11B1P28845 292 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 DDOSTP39656 456 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 ZNF121P58317 390 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-208ENST00000452047 FAM3AP98173 230 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 CDK5Q00535 292 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 FLOT2Q14254 428 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 GINS1Q14691 196 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 DNAL1Q4LDG9 190 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 KLHL12Q53G59 568 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-208ENST00000452047 PLBD1Q6P4A8 553 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 BTNL3Q6UXE8 466 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 LRRN1Q6UXK5 716 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 SHFQ7M4L6 423 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 SPERTQ8NA61 448 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 PAPD5Q8NDF8 572 aaKnown RBP10.39□□□□□ -0.75
CPSF4-208ENST00000452047 OTULINQ96BN8 352 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 SGK3Q96BR1 496 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 ZMYND19Q96E35 227 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-208ENST00000452047 C1orf147Q96MC9 270 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-208ENST00000452047 OR51V1Q9H2C8 321 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 ZNF319Q9P2F9 582 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 CTSZQ9UBR2 303 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 CLN8Q9UBY8 286 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 N6AMT1Q9Y5N5 214 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
CPSF4-208ENST00000452047 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 C22orf46C9J442 243 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 PRR23D1E9PI22 279 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 LGALS8O00214 317 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms