RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	ZNF362	Q5T0B9	420 aa	Predicted RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	C12orf54	Q6X4T0	127 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	COLCA1	Q6ZS62	124 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	TMEM179B	Q7Z7N9	219 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	SPATA24	Q86W54	205 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	KLB	Q86Z14	1044 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ERI1	Q8IV48	349 aa	Known RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ADGRG5	Q8IZF4	528 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	HS3ST5	Q8IZT8	346 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	DEFB108B	Q8NET1	73 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	OR11L1	Q8NGX0	322 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	OR6N2	Q8NGY6	317 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	GIPC3	Q8TF64	312 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ASB9	Q96DX5	294 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	DUX5	Q96PT3	197 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	FEV	Q99581	238 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	MRI1	Q9BV20	369 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	CHID1	Q9BWS9	393 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	OR51V1	Q9H2C8	321 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	MMADHC	Q9H3L0	296 aa	Predicted RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	BRD7	Q9NPI1	651 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	TAS2R1	Q9NYW7	299 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	DNAJC27	Q9NZQ0	273 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	BAIAP2	Q9UQB8	552 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	PPIAL4A	Q9Y536	164 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	AUP1	Q9Y679	476 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	PPIAL4E	A0A075B759	164 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	hCG_1807616	A0A1W2PRN6	198 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	DHRS12	A0PJE2	317 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859		A6NLC8	198 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF878	C9JN71	531 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	PPIAL4D	F5H284	164 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	DYNC1I1	O14576	645 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	GYG2	O15488	501 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	GRP	P07492	148 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	PPIAL4F	P0DN26	164 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF12	P17014	697 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	HSD11B1	P28845	292 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	SLC25A1	P53007	311 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	HILS1	P60008	231 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF154	Q13106	437 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	MAB21L1	Q13394	359 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	TIGD6	Q17RP2	521 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	KLHL12	Q53G59	568 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	SFRP4	Q6FHJ7	346 aa	Predicted RBP	7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	PLBD1	Q6P4A8	553 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	SHISA2	Q6UWI4	295 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	DRAM2	Q6UX65	266 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	LYPD2	Q6UXB3	125 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	TRPM8	Q7Z2W7	1104 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	DPY19L4	Q7Z388	723 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	C1orf87	Q8N0U7	546 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	SIGLECL1	Q8N7X8	197 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	OR56B2P	Q8NGI1	322 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	CANT1	Q8WVQ1	401 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	GCDH	Q92947	438 aa	Predicted RBP	7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	ZMYND19	Q96E35	227 aa	Predicted RBP	7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	NEIL1	Q96FI4	390 aa	Predicted RBP	7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	INTS14	Q96SY0	518 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	KCNJ15	Q99712	375 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	TMEM246	Q9BRR3	403 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	SUCNR1	Q9BXA5	334 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	DGCR6L	Q9BY27	220 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	NMNAT2	Q9BZQ4	307 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	TMEM165	Q9HC07	324 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	CMC2	Q9NRP2	79 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	DDX28	Q9NUL7	540 aa	Known RBP	7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	PDP1	Q9P0J1	537 aa	Predicted RBP	7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	LRCH1	Q9Y2L9	728 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	INSIG2	Q9Y5U4	225 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859	NBEAL1	Q6ZS30	2694 aa		7.26	□□□□□ -1.25
RFX3-209	ENST00000451859		A0A0A6YYJ9	748 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	TRAV40	A0A0B4J280	105 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859		A8MXK9	166 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	TRIM77	I1YAP6	450 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	IFNL4	K9M1U5	179 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	ACOT8	O14734	319 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	FSHB	P01225	129 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	WNT2	P09544	360 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	PAICS	P22234	425 aa	Known RBP	7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	PRKACG	P22612	351 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	FPR2	P25090	351 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	GSTT1	P30711	240 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	GRK5	P34947	590 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	CD200	P41217	278 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	NAA10	P41227	235 aa	Predicted RBP	7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	PITPNB	P48739	271 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	CBX1	P83916	185 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	FLOT2	Q14254	428 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	GINS1	Q14691	196 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	OR8B8	Q15620	311 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF404	Q494X3	552 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	LINC01590	Q5TEZ4	76 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF826P	Q6ZT77	177 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	FAM57B	Q71RH2	274 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	NLRC3	Q7RTR2	1065 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	BCL6B	Q8N143	479 aa	Predicted RBP	7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	OR8B3	Q8NGG8	313 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	OR8S1	Q8NH09	359 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms