RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TRAF3IP2O43734 574 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 TMEM127O75204 238 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 CCL3P10147 92 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 IGFBP3P17936 291 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 PRKXP51817 358 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 RAB4BP61018 213 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 MRPS10P82664 201 aaKnown RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 IL11RAQ14626 422 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 MOGAT2Q3SYC2 334 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 SLC25A53Q5H9E4 307 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 GLT8D1Q68CQ7 371 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 TCEAL6Q6IPX3 200 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 FAM198BQ6UWH4 519 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 LUZP2Q86TE4 346 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 WDR89Q96FK6 387 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 ZNF69Q9UC07 566 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 MTFP1Q9UDX5 166 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 B3GALT1Q9Y5Z6 326 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 PYCARD-AS1I3L0S3 204 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 AQP8O94778 261 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 TTRP02766 147 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 GTF2F2P13984 249 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 MUC1P15941 1255 aaPredicted RBP10.71□□□□□ -0.7
COL27A1-202ENST00000451716 SSTR2P30874 369 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 RAG2P55895 527 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 DLX5P56178 289 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 OLFML2AQ68BL7 652 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 ZFP82Q8N141 532 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 OR4D6Q8NGJ1 314 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 SLC39A7Q92504 469 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 SPACA1Q9HBV2 294 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 DLL4Q9NR61 685 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 FAM212BQ9NTI7 297 aaPredicted RBP10.71□□□□□ -0.7
COL27A1-202ENST00000451716 ZFP57Q9NU63 452 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 GHRLQ9UBU3 117 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 LHFPL6Q9Y693 200 aa10.71□□□□□ -0.7
COL27A1-202ENST00000451716 KNTC1P50748 2209 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 MEIKINA0A087WXM9 373 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 IGLV3-32A0A0A0MS00 114 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 A0A1W2PNV4 684 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 SULT2B1O00204 365 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 CD3DP04234 171 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 PGA4P0DJD7 388 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 PGA3P0DJD8 388 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 COX6A1P12074 109 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF43P17038 809 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 RPS18P62269 152 aaKnown RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 SNTB1Q13884 538 aaKnown RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 RNF144BQ7Z419 303 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 Q8NFD4 153 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 OR2T35Q8NGX2 323 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 ADAT3Q96EY9 351 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 SPACA5Q96QH8 159 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 PTGES2Q9H7Z7 377 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF160Q9HCG1 818 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 CA10Q9NS85 328 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 FAM206AQ9NX38 181 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 GDF2Q9UK05 429 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 NCOA6Q14686 2063 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 NAP1L6A6NFF2 107 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 RER1O15258 196 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 CRTAPO75718 401 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 IGHG1P01857 330 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 SPP1P10451 314 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 PRSS3P35030 304 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 MNDAP41218 407 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 CLDN6P56747 220 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 UBE2MP61081 183 aaKnown RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 ELFN2Q5R3F8 820 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-202ENST00000451716 FGD2Q7Z6J4 655 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 NOXO1Q8NFA2 376 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 FAM46BQ96A09 425 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 SORCS2Q96PQ0 1159 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 PBOV1Q9GZY1 135 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 C1orf198Q9H425 327 aa10.7□□□□□ -0.7
COL27A1-202ENST00000451716 NPIPB13A6NJU9 1138 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 NPIPB4C9JG80 1138 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 NTN3O00634 580 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-202ENST00000451716 NDUFB6O95139 128 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 CFDP00746 253 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-202ENST00000451716 RLN1P04808 185 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 QDPRP09417 244 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 ACHEP22303 614 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 GFOD2Q3B7J2 385 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 KLHL24Q6TFL4 600 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 DNM1P46Q6ZS02 220 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 NLRC3Q7RTR2 1065 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 COMMD2Q86X83 199 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 TGIF2LXQ8IUE1 241 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 FADS6Q8N9I5 356 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 UXS1Q8NBZ7 420 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 ACBD4Q8NC06 268 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 OR10J5Q8NHC4 309 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 OR51E1Q8TCB6 317 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms