RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	SLC35D3	Q5M8T2	416 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	BTNL3	Q6UXE8	466 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	MOGAT3	Q86VF5	341 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	FTMT	Q8N4E7	242 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	BPIFB2	Q8N4F0	458 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	OR9Q1	Q8NGQ5	310 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	CLPTM1L	Q96KA5	538 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	NIPAL2	Q9H841	368 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	ZMAT3	Q9HA38	289 aa	Known RBP	13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	ABCB9	Q9NP78	766 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	PDP1	Q9P0J1	537 aa	Predicted RBP	13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	RNF7	Q9UBF6	113 aa		13.44	□□□□□ -0.26
SGCE-208	ENST00000450385	PRR23D1	E9PI22	279 aa	Predicted RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	TRAPPC2L	H3BP13	241 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	PHYH	O14832	338 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	E2F6	O75461	281 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	TIPRL	O75663	272 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	ATP5H	O75947	161 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	VENTX	O95231	258 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	HLA-DPB1	P04440	258 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	GYPB	P06028	91 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	LIPF	P07098	398 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	RPS2	P15880	293 aa	Known RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	HSD11B1	P28845	292 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	COMP	P49747	757 aa	Predicted RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	GNB2	P62879	340 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	EIF2B1	Q14232	305 aa	Known RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	SNAI3	Q3KNW1	292 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	CD276	Q5ZPR3	534 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	DPY19L4	Q7Z388	723 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	DEFB108B	Q8NET1	73 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	CSNK2A3	Q8NEV1	391 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	OR8B3	Q8NGG8	313 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	RAB40A	Q8WXH6	277 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	OR8B2	Q96RD0	313 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	TMEM246	Q9BRR3	403 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	NUP50	Q9UKX7	468 aa		13.43	□□□□□ -0.26
SGCE-208	ENST00000450385	TRAV38-1	A0A0B4J264	116 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	ACOD1	A6NK06	481 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	ANKRD30BL	A7E2S9	258 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	CYB5R3	P00387	301 aa	Predicted RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	CA6	P23280	308 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	PMEL	P40967	661 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	RPS27	P42677	84 aa	Known RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	PRKX	P51817	358 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	PAX2	Q02962	417 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	GINS1	Q14691	196 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	ARMCX4	Q5H9R4	360 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	GLYATL3	Q5SZD4	288 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	DEGS2	Q6QHC5	323 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	RBMS3	Q6XE24	437 aa	Known RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	TIGD4	Q8IY51	512 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	DVL3	Q92997	716 aa	Predicted RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	DMRTB1	Q96MA1	342 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	ADAT1	Q9BUB4	502 aa	Known RBP	13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	ABHD6	Q9BV23	337 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	OR10A2	Q9H208	303 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	MMP26	Q9NRE1	261 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	POMP	Q9Y244	141 aa		13.42	□□□□□ -0.26
SGCE-208	ENST00000450385	KIR2DS1	A0A191URI9	304 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	CLU	P10909	449 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	CFHR2	P36980	270 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	PSMB10	P40306	273 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	OPRL1	P41146	370 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	CX3CR1	P49238	355 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	CBX1	P83916	185 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	TIGD6	Q17RP2	521 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	SPATA24	Q86W54	205 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	ERI1	Q8IV48	349 aa	Known RBP	13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	PARP8	Q8N3A8	854 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	OR6N2	Q8NGY6	317 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	OTOS	Q8NHW6	89 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	PRRG3	Q9BZD7	231 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	RNPEPL1	Q9HAU8	725 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	SLC25A19	Q9HC21	320 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	CLN8	Q9UBY8	286 aa		13.41	□□□□□ -0.26
SGCE-208	ENST00000450385	LGALS8	O00214	317 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	FAM20B	O75063	409 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	FKBP6	O75344	327 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	ANXA2	P07355	339 aa	Known RBP	13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	LYN	P07948	512 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	H2BFM	P0C1H6	154 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	POU1F1	P28069	291 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	PITPNB	P48739	271 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	ESRRG	P62508	458 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	FAM3A	P98173	230 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	LYPD4	Q6UWN0	246 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	C9orf139	Q6ZV77	190 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	PRSS45	Q7RTY3	260 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	OR2AE1	Q8NHA4	323 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	DACT3	Q96B18	629 aa	Predicted RBP	13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	SGK3	Q96BR1	496 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	ENOPH1	Q9UHY7	261 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	TMEM14A	Q9Y6G1	99 aa		13.4	□□□□□ -0.26
SGCE-208	ENST00000450385	IGHV2-70D	A0A0C4DH43	119 aa		13.39	□□□□□ -0.27

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