RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CENPMQ9NSP4 180 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 MYEF2Q9P2K5 600 aaKnown RBP14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 ERGIC3Q9Y282 383 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 IGHV4-61A0A0C4DH41 118 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF878C9JN71 531 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 LYNX1G3V0Z9 82 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 RER1O15258 196 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 DOK2O60496 412 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF254O75437 659 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 CLPXO76031 633 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 KRT8P05787 483 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 TACSTD2P09758 323 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 H2BFMP0C1H6 154 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 LYNX1P0DP58 116 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 COX5BP10606 129 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 CD36P16671 472 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF16P17020 682 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ALDH3B1P43353 468 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 PSG4Q00888 419 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 MOGQ16653 247 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 TIMM50Q3ZCQ8 353 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 PABPC1L2AQ5JQF8 200 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 CYB5R2Q6BCY4 276 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 DEGS2Q6QHC5 323 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF322Q6U7Q0 402 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 LINC00299Q6ZSB3 139 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 FAM220AQ7Z4H9 259 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 LHFPL3Q86UP9 236 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 KLHL36Q8N4N3 616 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ST7LQ8TDW4 575 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 NEU4Q8WWR8 484 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 CDCA4Q9BXL8 241 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 CDH20Q9HBT6 801 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ERVK13-1Q9NX77 482 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 ATPIF1Q9UII2 106 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 DUSP13Q9UII6 198 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 IKZF2Q9UKS7 526 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 COPS3Q9UNS2 423 aa14.6□□□□□ -0.07
PRPF40A-204ENST00000450303 MALRD1Q5VYJ5 2156 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 NDUFS8O00217 210 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 MYL12BO14950 172 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 APOC1P02654 83 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ERCC1P07992 297 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF182P17025 639 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 APLNRP35414 380 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 GRB2P62993 217 aaKnown RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF85Q03923 595 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ALKBH6Q3KRA9 238 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 CCDC92Q53HC0 331 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 RNLSQ5VYX0 342 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 CFAP77Q6ZQR2 320 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 SLC16A12Q6ZSM3 486 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF679Q8IYX0 411 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 OR1J2Q8NGS2 313 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 OR1F12Q8NHA8 337 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 AKR7LQ8NHP1 331 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 HAVCR2Q8TDQ0 301 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 RNF133Q8WVZ7 376 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 BORCS5Q969J3 196 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 MAP6Q96JE9 813 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 OR8B4Q96RC9 309 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 COQ7Q99807 217 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ATF6BQ99941 703 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 ALG8Q9BVK2 526 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 BPESC1Q9GZL8 116 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 WNT5BQ9H1J7 359 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 NIPAL2Q9H841 368 aa14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 MYOZ1Q9NP98 299 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 CAB39Q9Y376 341 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-204ENST00000450303 OR6C6A6NF89 314 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 METTL15A6NJ78 407 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 SYNGR3O43761 229 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 SULT1C4O75897 302 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 LCKP06239 509 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 APEX1P27695 318 aaKnown RBP14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 HSD11B1P28845 292 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 C21orf33P30042 268 aaPredicted RBP14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 HTR5AP47898 357 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 RIDAP52758 137 aaKnown RBP14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 ERVS71-1P61550 626 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 RPS23P62266 143 aaKnown RBP14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 ROM1Q03395 351 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 IRF3Q14653 427 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 CTF1Q16619 201 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF774Q6NX45 483 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 VASH1Q7L8A9 365 aaPredicted RBP14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 UBASH3BQ8TF42 649 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 SPTSSAQ969W0 71 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 MDFIQ99750 246 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 KLHDC2Q9Y2U9 406 aa14.58□□□□□ -0.08
PRPF40A-204ENST00000450303 LRP5LA4QPB2 252 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 M0R233 179 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 AIREO43918 545 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 PSKH1P11801 424 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 CCNOP22674 350 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 EVX1P49640 407 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 GDI2P50395 445 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 ETV1P50549 477 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 MRPL28Q13084 256 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms