RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 N6AMT1Q9Y5N5 214 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 NCOA6Q14686 2063 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 CNTRLQ7Z7A1 2325 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 NAP1L6A6NFF2 107 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 DHRS7CA6NNS2 312 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 SYNGR3O43761 229 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 SSX4O60224 188 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 GFRA3O60609 400 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 DHRS3O75911 302 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 ALX3O95076 343 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 IGLV3-1P01715 115 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 ALDOBP05062 364 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC2A1P11166 492 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 GABRA1P14867 456 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 RAB6AP20340 208 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 CRYGSP22914 178 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 CDK2P24941 298 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 THBS4P35443 961 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 KIR2DL3P43628 341 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 TAS2R20P59543 309 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 DGCR2P98153 550 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 AGAP6Q5VW22 663 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 Q6ZSR3 168 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF627Q7L945 461 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 DPPA2Q7Z7J5 298 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF100Q8IYN0 542 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 PP6455Q8WZ26 134 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC25A28Q96A46 364 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 ADAT3Q96EY9 351 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 FAM71F1Q96KD3 344 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 NEK6Q9HC98 313 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 TAS2R8Q9NYW2 309 aa9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 POLR3KQ9Y2Y1 108 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 EP300Q09472 2414 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-203ENST00000448935 WDFY3Q8IZQ1 3526 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 TMEM272A0A1B0GTI8 110 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 METTL21EPA6NDL7 271 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 GGT3PA6NGU5 568 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC22A20A6NK97 555 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 ORC5O43913 435 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 LMX1BO60663 402 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 CTAG2O75638 210 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 CD3GP09693 182 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 TRAPPC2P0DI81 140 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 TRAPPC2BP0DI82 140 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF32P17041 273 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC6A1P30531 599 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 GDNFP39905 211 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 HTR5AP47898 357 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 PTH2RP49190 550 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 GPR176Q14439 515 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 RSBN1Q5VWQ0 802 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 RAB12Q6IQ22 244 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 AKAP14Q86UN6 197 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 IZUMO1Q8IYV9 350 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 OR51A2Q8NGJ7 313 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 OR14K1Q8NGZ2 314 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 CREB3L1Q96BA8 519 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 OR2H1Q9GZK4 316 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 ATG5Q9H1Y0 275 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 DPAGT1Q9H3H5 408 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 RGCCQ9H4X1 137 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC7A10Q9NS82 523 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 CGGBP1Q9UFW8 167 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 RAB22AQ9UL26 194 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 LIPGQ9Y5X9 500 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 V9GYS6 101 aa9.25□□□□□ -0.93
VIPAS39-203ENST00000448935 MEIOCA2RUB1 952 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 AQP7O14520 342 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 LANCL1O43813 399 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 ADRB1P08588 477 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 UBBP0CG47 229 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 COX5BP10606 129 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF93P35789 620 aaPredicted RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 EIF2S3P41091 472 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 PSG4Q00888 419 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 SSBP1Q04837 148 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 GFOD2Q3B7J2 385 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF774Q6NX45 483 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 IGFL3Q6UXB1 125 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 P4HA3Q7Z4N8 544 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 FGD2Q7Z6J4 655 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 LYPD6Q86Y78 171 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 SKA3Q8IX90 412 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 UBE2J2Q8N2K1 259 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 PNLDC1Q8NA58 520 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 OR13C9Q8NGT0 318 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 ITFG2Q969R8 447 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 SARAFQ96BY9 339 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 CPNE2Q96FN4 548 aaPredicted RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 MARVELD1Q9BSK0 173 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 PRDM14Q9GZV8 571 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 MMP28Q9H239 520 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF319Q9P2F9 582 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 SPRR3Q9UBC9 169 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 NLKQ9UBE8 527 aa9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 FBLN5Q9UBX5 448 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms