RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 DLK1P80370 383 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 SPEM2Q0P670 501 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 IAH1Q2TAA2 248 aaPredicted RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 R3HDM4Q96D70 268 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 BSCL2Q96G97 398 aaPredicted RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC45A1Q9Y2W3 748 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 GRXCR1A8MXD5 290 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 M0R143 59 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 HSD17B7P56937 341 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 IL15RAQ13261 267 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 DTWD2Q8NBA8 298 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 LFNGQ8NES3 379 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 OR9A4Q8NGU2 314 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 FAM213BQ8TBF2 198 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 PRRX2Q99811 253 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 KIF26BQ2KJY2 2108 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 A0A087WWC5 75 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 PNPP00491 289 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 ASGR1P07306 291 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 THEGLP0DJG4 465 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 CXCR1P25024 350 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 SQSTM1Q13501 440 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 EXOSC7Q15024 291 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 LRRC18Q8N456 261 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 OR4D6Q8NGJ1 314 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 FAM210BQ96KR6 192 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 DNAJB12Q9NXW2 375 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 H0YL77 283 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 DLEU1O43261 78 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 SCGB1D2O95969 90 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 PGA4P0DJD7 388 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 PGA5P0DJD9 388 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HNF4GQ14541 408 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC17A1Q14916 467 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 ERGIC1Q969X5 290 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 THOC3Q96J01 351 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 SCGB3A2Q96PL1 93 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 PITPNC1Q9UKF7 332 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HSPB2A8KAH6 182 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 KLK2P20151 261 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HNRNPKP61978 463 aaKnown RBP eCLIP8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HSPB2Q16082 182 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HIKESHIQ53FT3 197 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 ALG10Q5BKT4 473 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 PLPP5Q8NEB5 264 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HPSE2Q8WWQ2 592 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 PTX4Q96A99 478 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 IL17BQ9UHF5 180 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 MPDZO75970 2070 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 TMEM269A0A1B0GVZ9 245 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 TLCD2A6NGC4 264 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 CPMP14384 443 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 GABRA4P48169 554 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 TANGO2Q6ICL3 276 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HSD17B11Q8NBQ5 300 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 OR13C3Q8NGS6 347 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 SNIP1Q8TAD8 396 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 FOXN4Q96NZ1 517 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 OR8B4Q96RC9 309 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 TMEM208Q9BTX3 173 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 GPR87Q9BY21 358 aa8.4□□□□□ -1.06
SYNPO2-204ENST00000448416 SNRNP200O75643 2136 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 GEMIN2O14893 280 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF264O43296 627 aa8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 RENP00797 406 aa8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 FCRL6Q6DN72 434 aa8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF429Q86V71 674 aa8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 METTL21AQ8WXB1 218 aa8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 ACTR3CQ9C0K3 210 aaPredicted RBP8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 SMDT1Q9H4I9 107 aa8.4□□□□□ -1.07
SYNPO2-204ENST00000448416 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 DFFBO76075 338 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 SCAF4O95104 1147 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 NPSP0C0P6 89 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 ZNF888P0CJ79 500 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 OR5H8P0DN80 308 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 IGFBP3P17936 291 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 TLX1P31314 330 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 GNG10P50151 68 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 RAB28P51157 221 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 METAP1P53582 386 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 METRNLQ641Q3 311 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 FDX2Q6P4F2 183 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 ADIPOR2Q86V24 386 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 THNSL2Q86YJ6 484 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 PRR18Q8N4B5 295 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 OTOSQ8NHW6 89 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 DNAJA3Q96EY1 480 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 ABLIM3O94929 683 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 TIMP1P01033 207 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 GLRA1P23415 457 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 GLIPR1P48060 266 aa8.39□□□□□ -1.07
SYNPO2-204ENST00000448416 RPS4XP62701 263 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms