RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CCR9P51686 369 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 GTF2A1P52655 376 aaPredicted RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 GBX2P52951 348 aaPredicted RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 CDH15P55291 814 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 SELENOVP59797 346 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 NANOS3P60323 173 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 KRTAP10-9P60411 292 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF92Q03936 586 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 PSG7Q13046 419 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 MRPL28Q13084 256 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 GK2Q14410 553 aaPredicted RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 KCTD21Q4G0X4 260 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 CCDC58Q4VC31 144 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 GLYATL3Q5SZD4 288 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 BCL2L15Q5TBC7 163 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 FBXW12Q6X9E4 464 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 LRP11Q86VZ4 500 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 CATSPERDQ86XM0 798 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 KLBQ86Z14 1044 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 ELMOD2Q8IZ81 293 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 FBXL14Q8N1E6 418 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 MUC15Q8N387 334 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 PRSS35Q8N3Z0 413 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF611Q8N823 705 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 OR8B12Q8NGG6 310 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 OR2G2Q8NGZ5 317 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 SYNPRQ8TBG9 265 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 HAVCR2Q8TDQ0 301 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 FBXW5Q969U6 566 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 MRPL24Q96A35 216 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 SPSB4Q96A44 273 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 MND1Q9BWT6 205 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 MRPL37Q9BZE1 423 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 PLK3Q9H4B4 646 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 RGCCQ9H4X1 137 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 UBTD1Q9HAC8 227 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 PTTG3PQ9NZH4 202 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 NUFIP1Q9UHK0 495 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 DUSP13Q9UII6 198 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 SLC22A13Q9Y226 551 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 MAST4O15021 2626 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 HEATR1Q9H583 2144 aaKnown RBP6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 ROS1P08922 2347 aa6.47□□□□□ -1.37
AC004540.1-206ENST00000448056 LRBAP50851 2863 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 IGLV3-9A0A075B6K5 115 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 A0A0U1RQV5 110 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 OR4C45A6NMZ5 311 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 B9A039 149 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 MYL12BO14950 172 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 OGG1O15527 345 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 XRCC2O43543 280 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 TACC2O95359 2948 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 TNFAIP8O95379 198 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 CLPTM1O96005 669 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 LALBAP00709 142 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 IGLV3-1P01715 115 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 CD8AP01732 235 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 IGHV3-13P01766 116 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 TTRP02766 147 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 SOD3P08294 240 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 DANCRP0C864 163 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 CFL1P23528 166 aaKnown RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 KIR3DL2P43630 455 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 MAP2K4P45985 399 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 WNT4P56705 351 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 KLF3P57682 345 aaPredicted RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 FAM3AP98173 230 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 EMX1Q04741 257 aaPredicted RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 ACSM1Q08AH1 577 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 ALKBH1Q13686 389 aaKnown RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 DOC2BQ14184 412 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 SPHARQ15513 63 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 EFNB3Q15768 340 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 MOGQ16653 247 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 TIGD6Q17RP2 521 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 TMEM255AQ5JRV8 349 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 WDR38Q5JTN6 314 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 AGAP6Q5VW22 663 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 XAF1Q6GPH4 301 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 RPL22L1Q6P5R6 122 aaKnown RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 ZNF773Q6PK81 442 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 PGAP1Q75T13 922 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 MRPL21Q7Z2W9 205 aaKnown RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 NAV2Q8IVL1 2488 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 RDH10Q8IZV5 341 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 SPARTQ8N0X7 666 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 OR2AE1Q8NHA4 323 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 OR51E1Q8TCB6 317 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 REEP6Q96HR9 211 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 LYZL4Q96KX0 146 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 OR5M11Q96RB7 305 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 NR1H4Q96RI1 486 aaPredicted RBP6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 SYT3Q9BQG1 590 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 MOB1AQ9H8S9 216 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 LIN7BQ9HAP6 207 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 FAIMQ9NVQ4 179 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 ZNF391Q9UJN7 358 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 GTF2A1LQ9UNN4 478 aa6.46□□□□□ -1.38
AC004540.1-206ENST00000448056 LSM2Q9Y333 95 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms