RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LOC107986453A0A1B0GWG9 222 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 TRIM64CA6NLI5 447 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 ZFPL1O95159 310 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR4A8P0C604 315 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 CELP19835 753 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 TAS2R43P59537 309 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 BDH1Q02338 343 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 ACSM1Q08AH1 577 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 ALKBH6Q3KRA9 238 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR2T2Q6IF00 324 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 FBXW12Q6X9E4 464 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 PGAP1Q75T13 922 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 TMEM200AQ86VY9 491 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR5AK2Q8NH90 309 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 SYNPRQ8TBG9 265 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 HAVCR2Q8TDQ0 301 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 SPSB4Q96A44 273 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 MARVELD3Q96A59 401 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 DHRS9Q9BPW9 319 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 REPIN1Q9BWE0 567 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 MRPL37Q9BZE1 423 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 CLEC4MQ9H2X3 399 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 DUSP13Q9UII6 198 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 CENPEQ02224 2701 aa15.43■□□□□ 0.06
TRAPPC4-203ENST00000447216 HS3ST1O14792 307 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 LMX1BO60663 402 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 IGLV3-1P01715 115 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 UBCP0CG48 685 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 ZNF250P15622 560 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 GCH1P30793 250 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 FAM3AP98173 230 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 MLLT11Q13015 90 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 PSG7Q13046 419 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 TSTQ16762 297 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 ARMCX4Q5H9R4 360 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 LIPKQ5VXJ0 399 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 MBNL2Q5VZF2 373 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 C1orf174Q8IYL3 243 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR5AS1Q8N127 324 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR13C5Q8NGS8 318 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 RGP1Q92546 391 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 FCGR1BQ92637 280 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 FBXW5Q969U6 566 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 MUL1Q969V5 352 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 MRPL24Q96A35 216 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 SMIM19Q96E16 107 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 MRPS26Q9BYN8 205 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 ISYNA1Q9NPH2 558 aa15.42■□□□□ 0.06
TRAPPC4-203ENST00000447216 CELSR2Q9HCU4 2923 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 hCG_38984A0A1B0GV85 526 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 A0A1B0GVI7 797 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 GGT3PA6NGU5 568 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 TMEM212A6NML5 194 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 RAC2P15153 192 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 APOBEC3AP31941 199 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 MAGEB1P43366 347 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 GSK3AP49840 483 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 GP2P55259 537 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 KLF3P57682 345 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 TNK1Q13470 666 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 BHLHE23Q8NDY6 225 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR56B2PQ8NGI1 322 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 OR51A4Q8NGJ6 313 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 GHSRQ92847 366 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 UFD1Q92890 307 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 HAVCR1Q96D42 359 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 PGLYRP3Q96LB9 341 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 COMMD4Q9H0A8 199 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 RGCCQ9H4X1 137 aa15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 PURGQ9UJV8 347 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 CHD3Q12873 2000 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-203ENST00000447216 H3BSA7 217 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 SYT7O43581 403 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 PLPP2O43688 288 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 TIMM8AO60220 97 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 LILRA1O75019 489 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 CPEP16870 476 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 ACHEP22303 614 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 TUBG1P23258 451 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 ACKR3P25106 362 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 SERPINF1P36955 418 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 TPBGQ13641 420 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 SSX1Q16384 188 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 TMEM244Q5VVB8 128 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 DOK3Q7L591 496 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 FBXL14Q8N1E6 418 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 GTF3AQ92664 365 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 C14orf79Q96F83 325 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 PLK3Q9H4B4 646 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 VCX3AQ9NNX9 186 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 TUBG2Q9NRH3 451 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 TAAR3PQ9P1P4 343 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 HECTD1Q9ULT8 2610 aa15.4■□□□□ 0.06
TRAPPC4-203ENST00000447216 A0A1W2PPW3 197 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 A6NIN4 97 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 CD300LBA8K4G0 201 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 VSTM5A8MXK1 200 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 IGHV3-13P01766 116 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 ISG15P05161 165 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 KITLGP21583 273 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms