RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 RPRD1BQ9NQG5 326 aaKnown RBP20.08■□□□□ 0.81
PMS1-214ENST00000446877 C14orf119Q9NWQ9 140 aa20.08■□□□□ 0.81
PMS1-214ENST00000446877 ALX3O95076 343 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 TROVE2P10155 538 aaKnown RBP eCLIP20.07■□□□□ 0.8
PMS1-214ENST00000446877 ZNF92Q03936 586 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 HIST2H2BDQ6DRA6 164 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 SLC15A3Q8IY34 581 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 GALNT4Q8N4A0 578 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 FAM162AQ96A26 154 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 RCN3Q96D15 328 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 PNRC2Q9NPJ4 139 aaKnown RBP20.07■□□□□ 0.8
PMS1-214ENST00000446877 KAAG1Q9UBP8 84 aa20.07■□□□□ 0.8
PMS1-214ENST00000446877 IGHV3OR15-7A0A075B7D8 119 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 ANKRD61A6NGH8 418 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 NOS3P29474 1203 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 SLC6A6P31641 620 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 GUCA2AQ02747 115 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 RFX4Q33E94 735 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 GCSAMQ8N6F7 178 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 OR4K13Q8NH42 304 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 ZNRD1Q9P1U0 126 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 CAPN7Q9Y6W3 813 aa20.06■□□□□ 0.8
PMS1-214ENST00000446877 BHLHE40O14503 412 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 PAHP00439 452 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 ZNF823P16415 610 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 RHCEP18577 417 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 GRK5P34947 590 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 SF3A3Q12874 501 aaKnown RBP eCLIP20.05■□□□□ 0.87e-8■■■■□ 25.4
PMS1-214ENST00000446877 MICBQ29980 383 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 SNAI3Q3KNW1 292 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 TEX36Q5VZQ5 186 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 Q6ZTK2 550 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 ZBTB46Q86UZ6 589 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 OR2AE1Q8NHA4 323 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 FANK1Q8TC84 345 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 SEMA6AQ9H2E6 1030 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 KCNG2Q9UJ96 466 aa20.05■□□□□ 0.8
PMS1-214ENST00000446877 TRBV4-1A0A0J9YWV2 114 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 G3V4G9 280 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 ARPC3O15145 178 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 LHBP01229 141 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 HIST1H1CP16403 213 aaKnown RBP20.04■□□□□ 0.8
PMS1-214ENST00000446877 DBPQ10586 325 aaPredicted RBP20.04■□□□□ 0.8
PMS1-214ENST00000446877 KRT72Q14CN4 511 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 SEC23BQ15437 767 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 METAP1DQ6UB28 335 aaPredicted RBP20.04■□□□□ 0.8
PMS1-214ENST00000446877 LNX2Q8N448 690 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 LY6G5BQ8NDX9 201 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 OR52J3Q8NH60 311 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 OR5R1Q8NH85 324 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 MAP6Q96JE9 813 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 CCL13Q99616 98 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 IFT27Q9BW83 186 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 SIRT7Q9NRC8 400 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 NDUFAF4Q9P032 175 aa20.04■□□□□ 0.8
PMS1-214ENST00000446877 FCN3O75636 299 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 MUC1P15941 1255 aaPredicted RBP20.03■□□□□ 0.8
PMS1-214ENST00000446877 GABRA5P31644 462 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 BEAN1Q3B7T3 259 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 GLYATL3Q5SZD4 288 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 SLC35E4Q6ICL7 350 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 DRAM2Q6UX65 266 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 SLC36A1Q7Z2H8 476 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 OR8S1Q8NH09 359 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 DMRTB1Q96MA1 342 aa20.03■□□□□ 0.8
PMS1-214ENST00000446877 NPFFO15130 113 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 GPR37O15354 613 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 SLC7A2P52569 658 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 OR56B2PQ8NGI1 322 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 OR4C15Q8NGM1 316 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 HOPXQ9BPY8 73 aaPredicted RBP20.02■□□□□ 0.8
PMS1-214ENST00000446877 PPA2Q9H2U2 334 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 OR52D1Q9H346 318 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 OPA3Q9H6K4 179 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 RNPEPL1Q9HAU8 725 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 DNAJB11Q9UBS4 358 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 FBLN5Q9UBX5 448 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 N6AMT1Q9Y5N5 214 aa20.02■□□□□ 0.8
PMS1-214ENST00000446877 A0A1W2PRD5 423 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 A0A1W2PRF3 423 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 A0A1W2PRM7 423 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 OR6C68A6NDL8 312 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 ANKRD30BLA7E2S9 258 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 NDUFB3O43676 98 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 IDH3BO43837 385 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 OPN1MWP04001 364 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 OPN1MW2P0DN77 364 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 OPN1MW3P0DN78 364 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 GSK3BP49841 420 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 HERPUD1Q15011 391 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 TAF13Q15543 124 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 PCK2Q16822 640 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 WDR38Q5JTN6 314 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 REC114Q7Z4M0 266 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 FGFRL1Q8N441 504 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 RP9Q8TA86 221 aaKnown RBP20.01■□□□□ 0.79
PMS1-214ENST00000446877 LRRC29Q8WV35 223 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 FN3KQ9H479 309 aa20.01■□□□□ 0.79
PMS1-214ENST00000446877 MRPL22Q9NWU5 206 aaKnown RBP20.01■□□□□ 0.79
PMS1-214ENST00000446877 NME4O00746 187 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms