RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 AADACL4Q5VUY2 407 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 PRAMEF6Q5VXH4 476 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 TMEM163Q8TC26 289 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 IL4I1Q96RQ9 567 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 ADAT1Q9BUB4 502 aaKnown RBP15.8■□□□□ 0.12
HDAC4-203ENST00000445704 GABARAPL3Q9BY60 117 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 PRRG3Q9BZD7 231 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 YIPF3Q9GZM5 350 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 OPA3Q9H6K4 179 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 COPS3Q9UNS2 423 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 LRP12Q9Y561 859 aa15.8■□□□□ 0.12
HDAC4-203ENST00000445704 hCG_38984A0A1B0GV85 526 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 PLPP2O43688 288 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 ZNF205O95201 554 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 APOC1P02654 83 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 SRD5A1P18405 259 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 HNF1AP20823 631 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 GATA4P43694 442 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 FAM3AP98173 230 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 OR8G1Q15617 311 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 TIGD6Q17RP2 521 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 TMEM155Q4W5P6 130 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 LCN1P1Q5VSP4 162 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 LRRC28Q86X40 367 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-203ENST00000445704 RFLNBQ8N5W9 214 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 REEP6Q96HR9 211 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 TTTY10Q9BZA0 68 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 RIBC2Q9H4K1 309 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 G6PC2Q9NQR9 355 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 MRPL15Q9P015 296 aaKnown RBP15.79■□□□□ 0.12
HDAC4-203ENST00000445704 ENOPH1Q9UHY7 261 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 LAMP5Q9UJQ1 280 aa15.79■□□□□ 0.12
HDAC4-203ENST00000445704 TRAV20A0A0B4J274 112 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 PSMD9O00233 223 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 PSMA6P60900 246 aaKnown RBP15.78■□□□□ 0.12
HDAC4-203ENST00000445704 MPPED2Q15777 294 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 ZNF181Q2M3W8 571 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 GFOD2Q3B7J2 385 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 FAM201AQ5SY85 155 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 NXNL2Q5VZ03 156 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 MEPCEQ7L2J0 689 aaKnown RBP15.78■□□□□ 0.12
HDAC4-203ENST00000445704 KRT77Q7Z794 578 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-203ENST00000445704 CELF2-AS1Q8N7Q2 184 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 OR52H1Q8NGJ2 320 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 PGAM5Q96HS1 289 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 RBM4BQ9BQ04 359 aaKnown RBP15.78■□□□□ 0.12
HDAC4-203ENST00000445704 SLC22A4Q9H015 551 aa15.78■□□□□ 0.12
HDAC4-203ENST00000445704 CUBNO60494 3623 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 IFNL4K9M1U5 179 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 GMDSO60547 372 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 FAM20BO75063 409 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 ANPEPP15144 967 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 SEC61A1P61619 476 aaKnown RBP15.77■□□□□ 0.12
HDAC4-203ENST00000445704 HOXA4Q00056 320 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-203ENST00000445704 ZFP1Q6P2D0 407 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 CNN2Q99439 309 aaKnown RBP15.77■□□□□ 0.12
HDAC4-203ENST00000445704 MDFIQ99750 246 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 OR10A2Q9H208 303 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 PPP1R3EQ9H7J1 279 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 SP140LQ9H930 580 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 PATZ1Q9HBE1 687 aaKnown RBP15.77■□□□□ 0.12
HDAC4-203ENST00000445704 ADGRL4Q9HBW9 690 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 UFSP2Q9NUQ7 469 aa15.77■□□□□ 0.12
HDAC4-203ENST00000445704 F5H0A9 414 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-203ENST00000445704 EI24O14681 340 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 PTBP3O95758 552 aaKnown RBP15.76■□□□□ 0.11
HDAC4-203ENST00000445704 IFNA2P01563 188 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 ALPLP05186 524 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 PCMT1P22061 227 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 ZFP36P26651 326 aaKnown RBP15.76■□□□□ 0.11
HDAC4-203ENST00000445704 MDH2P40926 338 aaKnown RBP15.76■□□□□ 0.11
HDAC4-203ENST00000445704 GSK3AP49840 483 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 LCN2P80188 198 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 SPICQ8N5J4 248 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 OR8B12Q8NGG6 310 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 Q8TCH9 128 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 LYZL4Q96KX0 146 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 OR8B4Q96RC9 309 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 PCDHB10Q9UN67 800 aa15.76■□□□□ 0.11
HDAC4-203ENST00000445704 NOP16Q9Y3C1 178 aaKnown RBP15.76■□□□□ 0.11
HDAC4-203ENST00000445704 SVEP1Q4LDE5 3571 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 SLC22A31A6NKX4 558 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 ANKRD30BLA7E2S9 258 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 CEACAM18A8MTB9 384 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 AVPP01185 164 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 DDOSTP39656 456 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 ROM1Q03395 351 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 OR8B8Q15620 311 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 FAHD2BQ6P2I3 314 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-203ENST00000445704 KCTD18Q6PI47 426 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-203ENST00000445704 C1orf229Q6ZS94 237 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-203ENST00000445704 WDR86Q86TI4 376 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 SLC35F2Q8IXU6 374 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 KLHL36Q8N4N3 616 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 C19orf18Q8NEA5 215 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 FAHD2AQ96GK7 314 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 NIPAL2Q9H841 368 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 TMEM165Q9HC07 324 aa15.75■□□□□ 0.11
HDAC4-203ENST00000445704 FAM206AQ9NX38 181 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms