RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MMP16P51512 607 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 NANOS3P60323 173 aaKnown RBP14.78□□□□□ -0.04
LIME1-202ENST00000444951 RPS23P62266 143 aaKnown RBP14.78□□□□□ -0.04
LIME1-202ENST00000444951 EMX1Q04741 257 aaPredicted RBP14.78□□□□□ -0.04
LIME1-202ENST00000444951 WDR38Q5JTN6 314 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 RNLSQ5VYX0 342 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 ZNF544Q6NX49 715 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 COLCA1Q6ZS62 124 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 NUP37Q8NFH4 326 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 OR52H1Q8NGJ2 320 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 OR2G2Q8NGZ5 317 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 RNF166Q96A37 237 aaPredicted RBP14.78□□□□□ -0.04
LIME1-202ENST00000444951 REEP6Q96HR9 211 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 SYT3Q9BQG1 590 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 TRIM36Q9NQ86 728 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 G6PC2Q9NQR9 355 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 FRRS1LQ9P0K9 344 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 DUSP13Q9UII6 198 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 ZANQ9Y493 2812 aa14.77□□□□□ -0.04
LIME1-202ENST00000444951 DSCAMO60469 2012 aa14.77□□□□□ -0.04
LIME1-202ENST00000444951 TRBV2A0A0J9YWF9 115 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 P2RY10O00398 339 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 MRPS14O60783 128 aaKnown RBP14.77□□□□□ -0.05
LIME1-202ENST00000444951 OR4A8P0C604 315 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 GCH1P30793 250 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 GLRXP35754 106 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 ZNF92Q03936 586 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 ALKBH1Q13686 389 aaKnown RBP14.77□□□□□ -0.05
LIME1-202ENST00000444951 SPHARQ15513 63 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 MSMPQ1L6U9 139 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 ZNF718Q3SXZ3 478 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 MRPL21Q7Z2W9 205 aaKnown RBP14.77□□□□□ -0.05
LIME1-202ENST00000444951 LRP11Q86VZ4 500 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 ZNF485Q8NCK3 441 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 OR51E1Q8TCB6 317 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 TMEM171Q8WVE6 324 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 SGK3Q96BR1 496 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 CMBLQ96DG6 245 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 C18orf12Q96KH6 178 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 ZNF696Q9H7X3 374 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 MOB1AQ9H8S9 216 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 ACOT13Q9NPJ3 140 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 NUFIP1Q9UHK0 495 aaKnown RBP14.77□□□□□ -0.05
LIME1-202ENST00000444951 LSM2Q9Y333 95 aaKnown RBP14.77□□□□□ -0.05
LIME1-202ENST00000444951 CMAHPQ9Y471 501 aa14.77□□□□□ -0.05
LIME1-202ENST00000444951 SIRT4Q9Y6E7 314 aaPredicted RBP14.77□□□□□ -0.05
LIME1-202ENST00000444951 ABCA2Q9BZC7 2435 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 A0A087WXM4 84 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 ACOD1A6NK06 481 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 VSTM5A8MXK1 200 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 XRCC2O43543 280 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 ICMTO60725 284 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 CLPTM1O96005 669 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 TTRP02766 147 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 INHBBP09529 407 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 SLC3A1Q07837 685 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 MRPL28Q13084 256 aaKnown RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 GK2Q14410 553 aaPredicted RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 TBCEQ15813 527 aaPredicted RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 NEDD8Q15843 81 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 ALKBH6Q3KRA9 238 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 PGAP1Q75T13 922 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 BIVMQ86UB2 503 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 ELMOD2Q8IZ81 293 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 RDH10Q8IZV5 341 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 CIARTQ8N365 385 aaPredicted RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 ZNF676Q8N7Q3 588 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 SYNPRQ8TBG9 265 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 KLF14Q8TD94 323 aaPredicted RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 FBXW5Q969U6 566 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 MARS2Q96GW9 593 aaKnown RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 FAM71F1Q96KD3 344 aaPredicted RBP14.76□□□□□ -0.05
LIME1-202ENST00000444951 COG8Q96MW5 612 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 GPR84Q9NQS5 396 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 TLN2Q9Y4G6 2542 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 RTTNQ86VV8 2226 aa14.76□□□□□ -0.05
LIME1-202ENST00000444951 TRIM64A6NGJ6 449 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 J3QW42 95 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 HS3ST1O14792 307 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 TGM4P49221 684 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 CDK5R1Q15078 307 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 ADIPOQQ15848 244 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 Q5PR19 223 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 RPL22L1Q6P5R6 122 aaKnown RBP14.75□□□□□ -0.05
LIME1-202ENST00000444951 KCTD8Q6ZWB6 473 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 ZNF367Q7RTV3 350 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 OR5AS1Q8N127 324 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 BHLHE23Q8NDY6 225 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 LYZL4Q96KX0 146 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 DHRS9Q9BPW9 319 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 PDCD1LG2Q9BQ51 273 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 SOX7Q9BT81 388 aa14.75□□□□□ -0.05
LIME1-202ENST00000444951 MRPL37Q9BZE1 423 aaKnown RBP14.75□□□□□ -0.05
LIME1-202ENST00000444951 CADP27708 2225 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 A0A1B0GVI7 797 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 A0A1W2PPW3 197 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 GGT3PA6NGU5 568 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 OR4C45A6NMZ5 311 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 TIMM8AO60220 97 aaPredicted RBP14.74□□□□□ -0.05
LIME1-202ENST00000444951 CELP19835 753 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms