RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 IL11RAQ14626 422 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 PLAC9Q5JTB6 97 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF546Q86UE3 836 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 SLC51BQ86UW2 128 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 OR2I1PQ8NGU4 316 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 IFI44Q8TCB0 444 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF416Q9BWM5 594 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 FN3KRPQ9HA64 309 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 IFT46Q9NQC8 304 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 NXT1Q9UKK6 140 aaKnown RBP14.13□□□□□ -0.15
SHQ1-202ENST00000444040 PLEKHA6Q9Y2H5 1048 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 C9orf170A2RU37 121 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 POM121CA8CG34 1229 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 CTSSP25774 331 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 FGL1Q08830 312 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 FAM57BQ71RH2 274 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 DOK3Q7L591 496 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 OR5M9Q8NGP3 310 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 MITD1Q8WV92 249 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 PROK2Q9HC23 129 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 ANAPC10Q9UM13 185 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 WDFY3Q8IZQ1 3526 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 A0A087WZY1 265 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 IGKV1-9A0A0C4DH69 117 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 C5orf63A6NC05 138 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 CCDC85CA6NKD9 419 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 B8ZZF3 427 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 SMAD9O15198 467 aaKnown RBP14.12□□□□□ -0.15
SHQ1-202ENST00000444040 CDC14BO60729 498 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 TBPP20226 339 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 AGTR1P30556 359 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 FAHD2BQ6P2I3 314 aaPredicted RBP14.12□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF283Q8N7M2 679 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 OR14K1Q8NGZ2 314 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 NTNG2Q96CW9 530 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 FAHD2AQ96GK7 314 aa14.12□□□□□ -0.15
SHQ1-202ENST00000444040 CCSO14618 274 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 SOCS1O15524 211 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 IGLV3-1P01715 115 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 TMEM50BP56557 158 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 LSM6P62312 80 aaKnown RBP14.11□□□□□ -0.15
SHQ1-202ENST00000444040 GRB2P62993 217 aaKnown RBP14.11□□□□□ -0.15
SHQ1-202ENST00000444040 PHYHD1Q5SRE7 291 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 KCNG3Q8TAE7 436 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 GAREM1Q9H706 876 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 CCDC163A0A0D9SF12 145 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 A0A1W2PP11 408 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 EFSO43281 561 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 TLX3O43711 291 aaPredicted RBP14.11□□□□□ -0.15
SHQ1-202ENST00000444040 KLF7O75840 302 aaPredicted RBP14.11□□□□□ -0.15
SHQ1-202ENST00000444040 MPIG6BO95866 241 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 CCL3P10147 92 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 COX6A1P12074 109 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 SLC25A4P12235 298 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 LIN54Q6MZP7 749 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 C11orf87Q6NUJ2 197 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 ADAD2Q8NCV1 583 aaKnown RBP14.11□□□□□ -0.15
SHQ1-202ENST00000444040 ST8SIA4Q92187 359 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 CYYR1Q96J86 154 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 ANGPTL4Q9BY76 406 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF700Q9H0M5 742 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 GPN3Q9UHW5 284 aaPredicted RBP14.11□□□□□ -0.15
SHQ1-202ENST00000444040 TNFSF18Q9UNG2 199 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 PI4KAP42356 2102 aa14.11□□□□□ -0.15
SHQ1-202ENST00000444040 SPDEFO95238 335 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 RLN2P04090 185 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 GSTP1P09211 210 aaKnown RBP14.1□□□□□ -0.15
SHQ1-202ENST00000444040 NAT1P18440 290 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 HOXA6P31267 233 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 IL13RA1P78552 427 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 C10orf128Q5T292 105 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 CRIP3Q6Q6R5 217 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 OPN5Q6U736 354 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 NAA40Q86UY6 237 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 OR1S1Q8NH92 325 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 SEC22AQ96IW7 307 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 GNRHR2Q96P88 292 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 BANF2Q9H503 90 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 MED12Q93074 2177 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 PMP2P02689 132 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 HIST1H1DP16402 221 aaKnown RBP14.1□□□□□ -0.15
SHQ1-202ENST00000444040 MGMTP16455 207 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF133P52736 654 aaPredicted RBP14.1□□□□□ -0.15
SHQ1-202ENST00000444040 SGCAQ16586 387 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 GFOD2Q3B7J2 385 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 OR4K15Q8NH41 348 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 TMEM54Q969K7 222 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 RAB3CQ96E17 227 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 TMEM41AQ96HV5 264 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 LYZL4Q96KX0 146 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 LINC00052Q96N35 136 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 A0A0D9SG52 128 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 ZIC3O60481 467 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 HCKP08631 526 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 CD63P08962 238 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 ZP3P21754 424 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 ENDOGQ14249 297 aaKnown RBP14.1□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF345Q14585 488 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 FOXL2NBQ6ZUU3 175 aa14.1□□□□□ -0.15
SHQ1-202ENST00000444040 HOGA1Q86XE5 327 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms