RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 KPTNQ9Y664 436 aa8.22□□□□□ -1.09
SYN3-204ENST00000441821 DYNC2H1Q8NCM8 4307 aaKnown RBP8.22□□□□□ -1.09
SYN3-204ENST00000441821 BIRC6Q9NR09 4857 aa8.21□□□□□ -1.09
SYN3-204ENST00000441821 A0A1B0GVI7 797 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 OR6C6A6NF89 314 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 A6NIZ1 184 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 LGALS8O00214 317 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 ADAM20O43506 726 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 FAM20BO75063 409 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 KRT36O76013 467 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 HLA-DPB1P04440 258 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 ATP6V1B2P21281 511 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 FPR3P25089 353 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 CD200P41217 278 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 GZMMP51124 257 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 RAD23AP54725 363 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 RAP1BP61224 184 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 RAP1AP62834 184 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 METAP1DQ6UB28 335 aaPredicted RBP8.21□□□□□ -1.1
SYN3-204ENST00000441821 BTN2A1Q7KYR7 527 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 VMO1Q7Z5L0 202 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 NKAIN4Q8IVV8 208 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 C11orf44Q8N8P7 122 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 BHLHE23Q8NDY6 225 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 OR1F12Q8NHA8 337 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 TMEM255BQ8WV15 326 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 CANT1Q8WVQ1 401 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 TMEM239Q8WW34 195 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 CENPNQ96H22 339 aaPredicted RBP8.21□□□□□ -1.1
SYN3-204ENST00000441821 C9orf16Q9BUW7 83 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 CHID1Q9BWS9 393 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 SEMA6AQ9H2E6 1030 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 PPA2Q9H2U2 334 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 REEP1Q9H902 201 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 TRIM36Q9NQ86 728 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 DNAJB9Q9UBS3 223 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 ATPIF1Q9UII2 106 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 SIGLEC9Q9Y336 463 aa8.21□□□□□ -1.1
SYN3-204ENST00000441821 OR10H3O60404 316 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 MPIG6BO95866 241 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 CST1P01037 141 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 DBHP09172 617 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 IFNGR2P38484 337 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 VHLP40337 213 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 CTXN1P60606 82 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 HOXA4Q00056 320 aaPredicted RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 EMX1Q04741 257 aaPredicted RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 AQP6Q13520 282 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 MPPED2Q15777 294 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 FOXB2Q5VYV0 432 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 SFRP4Q6FHJ7 346 aaPredicted RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 C1orf122Q6ZSJ8 110 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 ZDHHC13Q8IUH4 622 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 ZDHHC21Q8IVQ6 265 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 ADGRG5Q8IZF4 528 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 KLHDC1Q8N7A1 406 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 PAPD5Q8NDF8 572 aaKnown RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 PPP1R35Q8TAP8 253 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 APOBEC3DQ96AK3 386 aaPredicted RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 HSH2DQ96JZ2 352 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 HCAR1Q9BXC0 346 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 POLR2J2Q9GZM3 115 aaKnown RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 POLR2J3Q9H1A7 115 aaKnown RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 TOR3AQ9H497 397 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 ENOPH1Q9UHY7 261 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 RPUSD1Q9UJJ7 312 aaKnown RBP8.2□□□□□ -1.1
SYN3-204ENST00000441821 SH3GLB1Q9Y371 365 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 MED31Q9Y3C7 131 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 V9GYQ6 96 aa8.2□□□□□ -1.1
SYN3-204ENST00000441821 TRAV38-1A0A0B4J264 116 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 HTR3EA5X5Y0 456 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 OOEPA6NGQ2 149 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 K7EIL1 84 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 DVL1O14640 695 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 NPFFO15130 113 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 FCN3O75636 299 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 OR5F1O95221 314 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 EEF1B2P24534 225 aaKnown RBP8.19□□□□□ -1.1
SYN3-204ENST00000441821 RRM2P31350 389 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 TAS2R41P59536 307 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 LSM6P62312 80 aaKnown RBP8.19□□□□□ -1.1
SYN3-204ENST00000441821 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 OR8B8Q15620 311 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 CCDC92Q53HC0 331 aaPredicted RBP8.19□□□□□ -1.1
SYN3-204ENST00000441821 PRAMEF6Q5VXH4 476 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 RRM2BQ7LG56 351 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 LINC00471Q8N535 108 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 PACRGLQ8N7B6 248 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 LRRC75AQ8NAA5 344 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 PLPP7Q8NBV4 271 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 LY6G5BQ8NDX9 201 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 OR2T6Q8NHC8 308 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 TAMM41Q96BW9 452 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 DMRTB1Q96MA1 342 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 MMP28Q9H239 520 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 FN3KRPQ9HA64 309 aa8.19□□□□□ -1.1
SYN3-204ENST00000441821 ZNF556Q9HAH1 456 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms