RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MTFP1Q9UDX5 166 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 N6AMT1Q9Y5N5 214 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 TRAV18A0A075B6X5 111 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 PROB1E7EW31 1015 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 CEACAM4O75871 244 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 KDM4BO94953 1096 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 IGHG3P01860 377 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 MT-ND4P03905 459 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 COX5BP10606 129 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 PRF1P14222 555 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 GIFP27352 417 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-206ENST00000441580 NTF4P34130 210 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 PRSS3P35030 304 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 CD300CQ08708 224 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 PLA2G7Q13093 441 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 TBRG1Q3YBR2 411 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 ATAD3CQ5T2N8 411 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF774Q6NX45 483 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 FGD2Q7Z6J4 655 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 GLCCI1Q86VQ1 547 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 TUSC5Q8IXB3 177 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 FDCSPQ8NFU4 85 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 GCDHQ92947 438 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-206ENST00000441580 ITFG2Q969R8 447 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 LYZL4Q96KX0 146 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 WNT5BQ9H1J7 359 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 C20orf85Q9H1P6 137 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 CALHM2Q9HA72 323 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 MOV10Q9HCE1 1003 aaKnown RBP11.53□□□□□ -0.56
CPSF4-206ENST00000441580 GLRX2Q9NS18 164 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF319Q9P2F9 582 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 UPB1Q9UBR1 384 aa11.53□□□□□ -0.56
CPSF4-206ENST00000441580 MRPS28Q9Y2Q9 187 aaKnown RBP11.53□□□□□ -0.56
CPSF4-206ENST00000441580 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 XRCC2O43543 280 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 MMP7P09237 267 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-206ENST00000441580 ABOP16442 354 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 EIF2S3P41091 472 aaKnown RBP11.52□□□□□ -0.57
CPSF4-206ENST00000441580 CCL11P51671 97 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 RRAS2P62070 204 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-206ENST00000441580 CNN3Q15417 329 aaKnown RBP11.52□□□□□ -0.57
CPSF4-206ENST00000441580 PCGF3Q3KNV8 242 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF100Q8IYN0 542 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 SEMA6DQ8NFY4 1073 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 KCNG3Q8TAE7 436 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 GPX8Q8TED1 209 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 SSC4DQ8WTU2 575 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 NANOS1Q8WY41 292 aaKnown RBP11.52□□□□□ -0.57
CPSF4-206ENST00000441580 WDYHV1Q96HA8 205 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 TECTBQ96PL2 329 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 PRDM14Q9GZV8 571 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 CST11Q9H112 138 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 SLC7A10Q9NS82 523 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 SPRR3Q9UBC9 169 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 KNTC1P50748 2209 aa11.52□□□□□ -0.57
CPSF4-206ENST00000441580 PEX14O75381 377 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 DBHP09172 617 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 H2AFB2P0C5Z0 115 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 AKAIN1P0CW23 69 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 AGTR1P30556 359 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 RCVRNP35243 200 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 TAS2R19P59542 299 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 QRFPP83859 136 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ARF1P84077 181 aaKnown RBP11.51□□□□□ -0.57
CPSF4-206ENST00000441580 PSG4Q00888 419 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 SRSF6Q13247 344 aaKnown RBP11.51□□□□□ -0.57
CPSF4-206ENST00000441580 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ZFP69Q49AA0 526 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 SFRP5Q5T4F7 317 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ZBTB37Q5TC79 503 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 TMEM53Q6P2H8 277 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.51□□□□□ -0.57
CPSF4-206ENST00000441580 SKA3Q8IX90 412 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 TCTE3Q8IZS6 198 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 AKR7LQ8NHP1 331 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 REEP6Q96HR9 211 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-206ENST00000441580 GPER1Q99527 375 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 TRAF4Q9BUZ4 470 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-206ENST00000441580 ING3Q9NXR8 418 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 DLL3Q9NYJ7 618 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 PIGLQ9Y2B2 252 aa11.51□□□□□ -0.57
CPSF4-206ENST00000441580 MED13Q9UHV7 2174 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 A0A1B0GUH1 482 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 AQP7O14520 342 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 LCATP04180 440 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 CHRM2P08172 466 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 VSIG8P0DPA2 414 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 FAHP16930 419 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 WT1P19544 449 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-206ENST00000441580 PSMB1P20618 241 aaKnown RBP11.5□□□□□ -0.57
CPSF4-206ENST00000441580 PRKACBP22694 351 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 STOMP27105 288 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 ARR3P36575 388 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 RIPPLY1Q0D2K3 151 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms