RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EEF1B2P24534 225 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 AGTR1P30556 359 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CDAP32320 146 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 NAA10P41227 235 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MTNR1AP48039 350 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 ALDH3B2P48448 385 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CSNK1A1P48729 337 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 ETV1P50549 477 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CLRN1P58418 232 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 RPS7P62081 194 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 EMX1Q04741 257 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 RAB40BQ12829 278 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 TMED1Q13445 227 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 BLMHQ13867 455 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MEP1BQ16820 701 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 C10orf128Q5T292 105 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 TSPO2Q5TGU0 170 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 OR2G6Q5TZ20 316 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 KCTD8Q6ZWB6 473 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CHMP1BQ7LBR1 199 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 PRSS48Q7RTY5 328 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 P4HA3Q7Z4N8 544 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 STX19Q8N4C7 294 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF485Q8NCK3 441 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 PROKR2Q8NFJ6 384 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 SLC26A10Q8NG04 563 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 OR6K6Q8NGW6 343 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 OR2T4Q8NH00 348 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 LILRB1Q8NHL6 650 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 IPCEF1Q8WWN9 437 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 C11orf40Q8WZ69 217 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MCHR2Q969V1 340 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 NABP1Q96AH0 204 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 TMEM80Q96HE8 168 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 C16orf92Q96LL3 132 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 ALKBH3Q96Q83 286 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 OR5M11Q96RB7 305 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 AMELYQ99218 206 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 TBX5Q99593 518 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 PIMREGQ9BSJ6 248 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CDCA4Q9BXL8 241 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MRPS26Q9BYN8 205 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 TTTY10Q9BZA0 68 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CCDC90BQ9GZT6 254 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 OPN3Q9H1Y3 402 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 OR10A4Q9H209 315 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 RERGLQ9H628 205 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 ACOT13Q9NPJ3 140 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 SLC7A10Q9NS82 523 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 SCN3BQ9NY72 215 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 GLTPQ9NZD2 209 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 H2AFY2Q9P0M6 372 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 KLHL9Q9P2J3 617 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 PRSS50Q9UI38 385 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 BLOC1S6Q9UL45 172 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 DIMT1Q9UNQ2 313 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MOKQ9UQ07 419 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 LSM2Q9Y333 95 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 COMMD3-BMI1R4GMX3 469 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 A0A1W2PQL4 384 aaPredicted RBP4.09□□□□□ -1.75
PTPN4-206ENST00000441089 A0A1W2PRX2 142 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF726A6NNF4 738 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 C12orf71A8MTZ7 269 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 CENPBD1B2RD01 187 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 VWC2LB2RUY7 222 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 H7C417 338 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 M0QZ24 198 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 GPR171O14626 319 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 SLC43A1O75387 559 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 SEC14L2O76054 403 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 INMTO95050 263 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 ABHD16AO95870 558 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 LALBAP00709 142 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 CGAP01215 116 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 IGHV3-9P01782 118 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 YES1P07947 543 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 FCGR2AP12318 317 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 ALOX5APP20292 161 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 DCKP27707 260 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 LAP3P28838 519 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 CRABP1P29762 137 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 GCH1P30793 250 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 NR4A2P43354 598 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 PDLIM4P50479 330 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 EFNA4P52798 201 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 TUBA4AP68366 448 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 SIRPAP78324 504 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 ROR2Q01974 943 aaKnown RBP4.09□□□□□ -1.75
PTPN4-206ENST00000441089 HSF2Q03933 536 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 ENDOGQ14249 297 aaKnown RBP4.09□□□□□ -1.75
PTPN4-206ENST00000441089 RNPS1Q15287 305 aaKnown RBP4.09□□□□□ -1.75
PTPN4-206ENST00000441089 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.75
PTPN4-206ENST00000441089 NEDD8Q15843 81 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 CEACAM16Q2WEN9 425 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 GAGE13Q4V321 117 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 KLHL22Q53GT1 634 aa4.09□□□□□ -1.75
PTPN4-206ENST00000441089 THEM4Q5T1C6 240 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms