RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TEX30Q5JUR7 227 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 BTNL3Q6UXE8 466 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 DPY19L4Q7Z388 723 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 KLBQ86Z14 1044 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 BOLLQ8N9W6 283 aaKnown RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 OR56B2PQ8NGI1 322 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 DVL3Q92997 716 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 NEIL1Q96FI4 390 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 MMADHCQ9H3L0 296 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 TOR3AQ9H497 397 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 MMP26Q9NRE1 261 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 DNAJC27Q9NZQ0 273 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 MRPL15Q9P015 296 aaKnown RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 ANKRD30BLA7E2S9 258 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 A8MXK9 166 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 F5H0A9 414 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 TRIM77I1YAP6 450 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 GMDSO60547 372 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 FAM20BO75063 409 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 FKBP6O75344 327 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 DNAJC8O75937 253 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 GLCEO94923 617 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 ZNF154Q13106 437 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 MAB21L1Q13394 359 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 PCK2Q16822 640 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 FAM201AQ5SY85 155 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 LINC01590Q5TEZ4 76 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 PLBD1Q6P4A8 553 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 RBMS3Q6XE24 437 aaKnown RBP16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 SHFQ7M4L6 423 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 TMEM179BQ7Z7N9 219 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 SEMA6DQ8NFY4 1073 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 OR8S1Q8NH09 359 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 C22orf15Q8WYQ4 148 aa16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 ZMYND19Q96E35 227 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-204ENST00000440118 hCG_1807616A0A1W2PRN6 198 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 HMGN1P05114 100 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 H2BFMP0C1H6 154 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 OSMP13725 252 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 ZNF12P17014 697 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 CPT2P23786 658 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 PITPNBP48739 271 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 HILS1P60008 231 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 KCNJ8Q15842 424 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 ZNF404Q494X3 552 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 C12orf54Q6X4T0 127 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 FAM57BQ71RH2 274 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 HS3ST5Q8IZT8 346 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 DEFB108BQ8NET1 73 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 ZFAND2BQ8WV99 257 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 TMEM246Q9BRR3 403 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 ABHD6Q9BV23 337 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 TMEM165Q9HC07 324 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 BRD7Q9NPI1 651 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 DNAJB9Q9UBS3 223 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 OPN4Q9UHM6 478 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 POMPQ9Y244 141 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 INSIG2Q9Y5U4 225 aa16.64■□□□□ 0.25
SHROOM1-204ENST00000440118 A0A1B0GWJ7 208 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 ERICH4A6NGS2 130 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 TRAPPC2LH3BP13 241 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 GRPP07492 148 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 WNT2P09544 360 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 ANXA8P13928 327 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 OR8B8Q15620 311 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 MPPED2Q15777 294 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 USP43Q70EL4 1123 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 SPERTQ8NA61 448 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 C19orf18Q8NEA5 215 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 OR52H1Q8NGJ2 320 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 Q8TCH9 128 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 REEP6Q96HR9 211 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 PGAM5Q96HS1 289 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 OR10A2Q9H208 303 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 C14orf119Q9NWQ9 140 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 RNF7Q9UBF6 113 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 CLN8Q9UBY8 286 aa16.63■□□□□ 0.25
SHROOM1-204ENST00000440118 C5orf63A6NC05 138 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 LYNP07948 512 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 PRKACGP22612 351 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 CFL1P23528 166 aaKnown RBP16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 PMELP40967 661 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 NAA10P41227 235 aaPredicted RBP16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 ZNF121P58317 390 aaPredicted RBP16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 DCDC5Q6ZRR9 648 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 THEM6Q8WUY1 208 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 RNF133Q8WVZ7 376 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 C1orf123Q9NWV4 160 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 NUP50Q9UKX7 468 aa16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 POLR3KQ9Y2Y1 108 aaPredicted RBP16.62■□□□□ 0.25
SHROOM1-204ENST00000440118 PRODHO43272 600 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 SELENOFO60613 162 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 ANOS1P23352 680 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 GNALP38405 381 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 DDOSTP39656 456 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 LRRN1Q6UXK5 716 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 SLC16A9Q7RTY1 509 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 CPOQ8IVL8 374 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms