RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RAB39BQ96DA2 213 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 RAB3IPQ96QF0 476 aaPredicted RBP19.93■□□□□ 0.78
VARS-217ENST00000440048 GAL3ST1Q99999 423 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 H2AFY2Q9P0M6 372 aaPredicted RBP19.93■□□□□ 0.78
VARS-217ENST00000440048 ZNF319Q9P2F9 582 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 IFNL4K9M1U5 179 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 MSMBP08118 114 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 SBK2P0C263 348 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 MAB21L1Q13394 359 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 OR8G1Q15617 311 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 IL17RELQ6ZVW7 336 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 ZNF771Q7L3S4 317 aaPredicted RBP19.92■□□□□ 0.78
VARS-217ENST00000440048 MOGAT3Q86VF5 341 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 OR56B2PQ8NGI1 322 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 OR52H1Q8NGJ2 320 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 REEP6Q96HR9 211 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 PGAM5Q96HS1 289 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 SLC22A4Q9H015 551 aa19.92■□□□□ 0.78
VARS-217ENST00000440048 MRPL15Q9P015 296 aaKnown RBP19.92■□□□□ 0.78
VARS-217ENST00000440048 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.92■□□□□ 0.78
VARS-217ENST00000440048 TMEM178BH3BS89 294 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 CD200P41217 278 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 FAM3AP98173 230 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 KRT77Q7Z794 578 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 GLCCI1Q86VQ1 547 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 CELF2-AS1Q8N7Q2 184 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 OR51F2Q8NH61 342 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 CNN2Q99439 309 aaKnown RBP19.91■□□□□ 0.78
VARS-217ENST00000440048 ADAT1Q9BUB4 502 aaKnown RBP19.91■□□□□ 0.78
VARS-217ENST00000440048 OR10A2Q9H208 303 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 UBAP1Q9NZ09 502 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 NOP16Q9Y3C1 178 aaKnown RBP19.91■□□□□ 0.78
VARS-217ENST00000440048 LRP12Q9Y561 859 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 WNK2Q9Y3S1 2297 aa19.91■□□□□ 0.78
VARS-217ENST00000440048 SLC22A31A6NKX4 558 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 EI24O14681 340 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 ALPLP05186 524 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 FAM157CP0CG43 387 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 PMELP40967 661 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 RAD23AP54725 363 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 BTG1P62324 171 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 ZMYND11Q15326 602 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 LRRC28Q86X40 367 aaPredicted RBP19.9■□□□□ 0.78
VARS-217ENST00000440048 TMEM186Q96B77 213 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 NIPAL2Q9H841 368 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 S100A14Q9HCY8 104 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 HIF1ANQ9NWT6 349 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 USE1Q9NZ43 259 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 COPS3Q9UNS2 423 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 ARHGAP32A7KAX9 2087 aa19.9■□□□□ 0.78
VARS-217ENST00000440048 FBN1P35555 2871 aaKnown RBP19.89■□□□□ 0.78
VARS-217ENST00000440048 CUBNO60494 3623 aa19.89■□□□□ 0.78
VARS-217ENST00000440048 hCG_38984A0A1B0GV85 526 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 GMDSO60547 372 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 CYB5R3P00387 301 aaPredicted RBP19.89■□□□□ 0.77
VARS-217ENST00000440048 ANPEPP15144 967 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 HNF1AP20823 631 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 DDOSTP39656 456 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 GATA4P43694 442 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 PSMA6P60900 246 aaKnown RBP19.89■□□□□ 0.77
VARS-217ENST00000440048 GFOD2Q3B7J2 385 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 KCTD18Q6PI47 426 aaPredicted RBP19.89■□□□□ 0.77
VARS-217ENST00000440048 DEGS2Q6QHC5 323 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 GID4Q8IVV7 300 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 DVL3Q92997 716 aaPredicted RBP19.89■□□□□ 0.77
VARS-217ENST00000440048 ADGRL4Q9HBW9 690 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 TMEM14AQ9Y6G1 99 aa19.89■□□□□ 0.77
VARS-217ENST00000440048 PRR32B1ATL7 298 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 PSMD9O00233 223 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 PLPP2O43688 288 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 CFL1P23528 166 aaKnown RBP19.88■□□□□ 0.77
VARS-217ENST00000440048 ZNF181Q2M3W8 571 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 TMEM155Q4W5P6 130 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 PRAMEF6Q5VXH4 476 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 ASB17Q8WXJ9 295 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 TTTY10Q9BZA0 68 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 RGCCQ9H4X1 137 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 HAO2Q9NYQ3 351 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 ORC6Q9Y5N6 252 aa19.88■□□□□ 0.77
VARS-217ENST00000440048 TRAV20A0A0B4J274 112 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 PCMT1P22061 227 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 GSK3AP49840 483 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 ALDH3A2P51648 485 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 ROM1Q03395 351 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 MPPED2Q15777 294 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 SLC35F2Q8IXU6 374 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 CBR4Q8N4T8 237 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 SPICQ8N5J4 248 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 RFLNBQ8N5W9 214 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 OR8B12Q8NGG6 310 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 OR8J1Q8NGP2 316 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 ERGIC1Q969X5 290 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 OR8B4Q96RC9 309 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 MROQ9BYG7 248 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 PCDHB10Q9UN67 800 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 STAB1Q9NY15 2570 aa19.87■□□□□ 0.77
VARS-217ENST00000440048 LRRC30A6NM36 301 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 ANKRD30BLA7E2S9 258 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 ZNF205O95201 554 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 SRD5A1P18405 259 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms