RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR2A2Q6IF42 318 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SKA3Q8IX90 412 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 NKAIN3Q8N8D7 197 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 OR9K2Q8NGE7 335 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SMIM10Q96HG1 83 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 IP6K3Q96PC2 410 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 NOTCH4Q99466 2003 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 CNTNAP3Q9BZ76 1288 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 C1orf198Q9H425 327 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 PQLC2LA1A4F0 135 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 OR5K4A6NMS3 321 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 ZNF850A8MQ14 1090 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 C1QL1O75973 258 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 IFNA17P01571 189 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 CD74P04233 296 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 JMJD7P0C870 316 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 ZNF735P0CB33 412 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
COPB1-202ENST00000439561 BLVRBP30043 206 aaPredicted RBP8.09□□□□□ -1.11
COPB1-202ENST00000439561 RPS4XP62701 263 aaKnown RBP8.09□□□□□ -1.11
COPB1-202ENST00000439561 INSM1Q01101 510 aaPredicted RBP8.09□□□□□ -1.11
COPB1-202ENST00000439561 ZNF117Q03924 483 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 ALG11Q2TAA5 492 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SP6Q3SY56 376 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 ACTBL2Q562R1 376 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 C1orf140Q5VVS0 124 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 PRSS54Q6PEW0 395 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SULF2Q8IWU5 870 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 CTHRC1Q96CG8 243 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 BCL2L14Q9BZR8 327 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SLC2A4RGQ9NR83 387 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 YBX2Q9Y2T7 364 aaKnown RBP8.09□□□□□ -1.11
COPB1-202ENST00000439561 H0YIG0 161 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 H0YIZ8 118 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 RAB27BO00194 218 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 ASAH2BP0C7U1 165 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 PRTGQ2VWP7 1150 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 ZNF813Q6ZN06 617 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 SGPP2Q8IWX5 399 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 C19orf47Q8N9M1 422 aaKnown RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 AKR7LQ8NHP1 331 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 ARHGAP5-AS1Q96IT6 56 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 OR10C1Q96KK4 312 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 C2orf50Q96LR7 162 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 TGIF2Q9GZN2 237 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 FAM212BQ9NTI7 297 aaPredicted RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 MRPL22Q9NWU5 206 aaKnown RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 CEP290O15078 2479 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 A0A1W2PPE3 182 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 TGFBR3LH3BV60 316 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 HABP2Q14520 560 aaPredicted RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 C5orf46Q6UWT4 87 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 LINC00114Q6XXX2 140 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 SUMF2Q8NBJ7 301 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 TDRD6O60522 2096 aaKnown RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 NUDT19A8MXV4 375 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 NUDT21O43809 227 aaKnown RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 YIF1AO95070 293 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 MT-ND4LP03901 98 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 BIDP55957 195 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 CLRN1P58418 232 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 SKP2Q13309 424 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 GUK1Q16774 197 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 ISXQ2M1V0 245 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 ZNF260Q3ZCT1 412 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 SOHLH1Q5JUK2 328 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 PTCRAQ6ISU1 281 aaPredicted RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 MEX3BQ6ZN04 569 aaKnown RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 FAM57BQ71RH2 274 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 PPP1R3BQ86XI6 285 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 CATSPERDQ86XM0 798 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 STX12Q86Y82 276 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 MISPQ8IVT2 679 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 SLC30A7Q8NEW0 376 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 OR13H1Q8NG92 308 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 OR14K1Q8NGZ2 314 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 HIST1H2BAQ96A08 127 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 ADAT3Q96EY9 351 aaPredicted RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 PIGQQ9BRB3 760 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 TXNIPQ9H3M7 391 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 LUZP4Q9P127 313 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 CARHSP1Q9Y2V2 147 aaKnown RBP8.08□□□□□ -1.12
COPB1-202ENST00000439561 UNC80Q8N2C7 3258 aa8.08□□□□□ -1.12
COPB1-202ENST00000439561 SHISA8B8ZZ34 492 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 F5H5K5 113 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 NDUFS6O75380 124 aaKnown RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 OR2C1O95371 312 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 SFT2D2O95562 160 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 LAP3P28838 519 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 OR3A4PP47883 348 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 SLC6A8P48029 635 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 FHITP49789 147 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 DVL1P1P54792 670 aaPredicted RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 RNF212Q495C1 297 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PHLDA2Q53GA4 152 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 C16orf47Q6ZP98 133 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms