RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZNF436Q9C0F3 470 aaPredicted RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 C1orf123Q9NWV4 160 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 EPPINO95925 133 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 MGMTP16455 207 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 SRD5A2P31213 254 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 HAAOP46952 286 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 ARF1P84077 181 aaKnown RBP10.99□□□□□ -0.65
TCOF1-205ENST00000439160 WDR5BQ86VZ2 330 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 OR11L1Q8NGX0 322 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF416Q9BWM5 594 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.99□□□□□ -0.65
TCOF1-205ENST00000439160 B3GAT1Q9P2W7 334 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 ICAM5Q9UMF0 924 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 A0A0B4J2A0 478 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 TRIM64A6NGJ6 449 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 K7EPK0 472 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 XRCC2O43543 280 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 SDHBP21912 280 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 RFX2P48378 723 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 CD276Q5ZPR3 534 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 FAM71E2Q8N5Q1 922 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 OR4D6Q8NGJ1 314 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 OR51A2Q8NGJ7 313 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 OR2AE1Q8NHA4 323 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 OR1F12Q8NHA8 337 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 PAQR8Q8TEZ7 354 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 SMIM4Q8WVI0 70 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 BARHL1Q9BZE3 327 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 SHPKQ9UHJ6 478 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 MRM2Q9UI43 246 aaKnown RBP10.99□□□□□ -0.65
TCOF1-205ENST00000439160 A0A1W2PR80 420 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 CRYAAP02489 173 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 RAD52P43351 418 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 KIR2DL3P43628 341 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 AGFG1P52594 562 aaKnown RBP10.99□□□□□ -0.65
TCOF1-205ENST00000439160 MFGE8Q08431 387 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-205ENST00000439160 OR8B8Q15620 311 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 CDONQ4KMG0 1287 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 PLXDC2Q6UX71 529 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF610Q8N9Z0 462 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 SUMF1Q8NBK3 374 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 FAM234AQ9H0X4 552 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 TP53TG5Q9Y2B4 290 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 A0A1W2PR77 199 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 IFNA2P01563 188 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 GABRB1P18505 474 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 PLGLAQ15195 96 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 DNASE2BQ8WZ79 361 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 NECAP2Q9NVZ3 263 aa10.99□□□□□ -0.65
TCOF1-205ENST00000439160 CEBPZOSA8MTT3 80 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 SPRY1O43609 319 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-205ENST00000439160 TUSC2O75896 110 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 ALX3O95076 343 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 IFNA17P01571 189 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF32P17041 273 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 RPL23AP62750 156 aaKnown RBP10.98□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF774Q6NX45 483 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 DEFB108BQ8NET1 73 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 ARL11Q969Q4 196 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 PRSS27Q9BQR3 290 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 SLCO1B1Q9Y6L6 691 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 LRRC37A2A6NM11 1700 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 LALBAP00709 142 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 HLA-HP01893 362 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 HRH1P35367 487 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 HNF4GQ14541 408 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 SGK3Q96BR1 496 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 PATJQ8NI35 1801 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 PMS2P1A4D2B8 440 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 LIPT2A6NK58 231 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 CELA2AP08217 269 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 BAMBIQ13145 260 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 SLC22A25Q6T423 547 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-205ENST00000439160 SLC38A9Q8NBW4 561 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 OR51H1Q8NH63 302 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF2Q9BSG1 426 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-205ENST00000439160 HAO2Q9NYQ3 351 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 ST3GAL6Q9Y274 331 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 CHD5Q8TDI0 1954 aa10.98□□□□□ -0.65
TCOF1-205ENST00000439160 A0A0A6YYJ9 748 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 OR5H15A6NDH6 313 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 F8W036 122 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 H3BMH7 237 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 LINC01387J3KSC0 135 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 XRCC3O43542 346 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 RPL35P42766 123 aaKnown RBP10.97□□□□□ -0.65
TCOF1-205ENST00000439160 BLOC1S1P78537 153 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 DYRK1AQ13627 763 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF770Q6IQ21 691 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-205ENST00000439160 KIRREL1Q96J84 757 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 SMIM10L1P0DMW3 83 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 HLA-DOBP13765 273 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 TUBG1P23258 451 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 CATR1Q13166 79 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 OR4S1Q8NGB4 309 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 OR4C16Q8NGL9 310 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 M1APQ8TC57 530 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 SMIM10Q96HG1 83 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms