RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OR1J2Q8NGS2 313 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 CT55Q8WUE5 264 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 MARC2Q969Z3 335 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ZNF385AQ96PM9 386 aaKnown RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 PBOV1Q9GZY1 135 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 POFUT1Q9H488 388 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 PLEKHA1Q9HB21 404 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 RDH8Q9NYR8 311 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 SCP2D1Q9UJQ7 156 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 GDF2Q9UK05 429 aaPredicted RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 LHFPL6Q9Y693 200 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 RELNP78509 3460 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 SRSF10O75494 262 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 SELLP14151 372 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 LAP3P28838 519 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 RFC3P40938 356 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 NOVA1P51513 510 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 RAB14P61106 215 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 Q0VFX4 171 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TRA2AQ13595 282 aaKnown RBP eCLIP8.37□□□□□ -1.07
CUX1-206ENST00000437600 ATXN7L3Q14CW9 347 aaPredicted RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 CDNFQ49AH0 187 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 PHYHD1Q5SRE7 291 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 RAET1LQ5VY80 246 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 BAIAP2L2Q6UXY1 529 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 RHOUQ7L0Q8 258 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ZNF101Q8IZC7 436 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 GABRG1Q8N1C3 465 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 OR10K1Q8NGX5 313 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 MAFIPQ8WZ33 124 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ST8SIA1Q92185 356 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 SFXN2Q96NB2 322 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 SORCS2Q96PQ0 1159 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 SLC6A7Q99884 636 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 WDR54Q9H977 334 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 PRR13Q9NZ81 148 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 CYB5R1Q9UHQ9 305 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TCFL5Q9UL49 500 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TPRP12270 2363 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 RPS10-NUDT3A0A1W2PQS6 291 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 PHYHO14832 338 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ZNF432O94892 652 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TPOP07202 933 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 DBHP09172 617 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 HSD11B1P28845 292 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 STARP49675 285 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 DAP3P51398 398 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 NHLH1Q02575 133 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TGIF1Q15583 401 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 KLHL24Q6TFL4 600 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 FAM57BQ71RH2 274 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 CLEC1AQ8NC01 280 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ST8SIA2Q92186 375 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ST8SIA4Q92187 359 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 CDC6Q99741 560 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 C7orf50Q9BRJ6 194 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 RBM24Q9BX46 236 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 KLK13Q9UKR3 277 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ETV7Q9Y603 341 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 M0R233 179 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TNFSF15O95150 251 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 TGM6O95932 706 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 PI3P19957 117 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 SPINK2P20155 84 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 SLC6A9P48067 706 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 CXADRP78310 365 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 UNC119Q13432 240 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 RBMS2Q15434 407 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 ZNF626Q68DY1 528 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 FAM166AQ6J272 317 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 HDDC2Q7Z4H3 204 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 OR2M3Q8NG83 312 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 RNF133Q8WVZ7 376 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 RBPMSQ93062 196 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 GPR84Q9NQS5 396 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 ZNF275Q9NSD4 429 aaPredicted RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 FAM206AQ9NX38 181 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 UBQLN2Q9UHD9 624 aa8.37□□□□□ -1.07
CUX1-206ENST00000437600 NXT1Q9UKK6 140 aaKnown RBP8.37□□□□□ -1.07
CUX1-206ENST00000437600 LOC102723996A0A087X1L8 192 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 A0A1B0GUH1 482 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 OR5H15A6NDH6 313 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 ZNF726A6NNF4 738 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 ZNF205O95201 554 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 PLATP00750 562 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 IFNA7P01567 189 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 AKAIN1P0CW23 69 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 IGFBP3P17936 291 aaPredicted RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 ZNF121P58317 390 aaPredicted RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 SORDQ00796 357 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 SRSF6Q13247 344 aaKnown RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 C3orf33Q6P1S2 294 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 ZNF813Q6ZN06 617 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 SLC36A1Q7Z2H8 476 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 PPP1R32Q7Z5V6 425 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 YRDCQ86U90 279 aaKnown RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 MISPQ8IVT2 679 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 BATF2Q8N1L9 274 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms