RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 OR6V1Q8N148 313 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 LNX2Q8N448 690 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 GCSAMQ8N6F7 178 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 OR2AE1Q8NHA4 323 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 SIKE1Q9BRV8 207 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 PPA2Q9H2U2 334 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 SIRT7Q9NRC8 400 aa9.54□□□□□ -0.88
CHRNA1-207ENST00000435083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 A0A1B0GW55 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 M0R135 149 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 CXCR6O00574 342 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 PAHP00439 452 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 OPN1MWP04001 364 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 H1F0P07305 194 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L2P0CJ85 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L3P0CJ86 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L4P0CJ87 422 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L5P0CJ88 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L6P0CJ89 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L7P0CJ90 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 EEF1B2P24534 225 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 ELF3P78545 371 aaPredicted RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 C11orf91Q3C1V1 193 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 SNAI3Q3KNW1 292 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4L9Q6RFH8 374 aaPredicted RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 SMARCD3Q6STE5 483 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 CBLL1Q75N03 491 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 CMTM4Q8IZR5 234 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 GALNT4Q8N4A0 578 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 SPERTQ8NA61 448 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 NPRL2Q8WTW4 380 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 ZNF799Q96GE5 643 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 NMNAT3Q96T66 252 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 CCL13Q99616 98 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 NSRP1Q9H0G5 558 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 PNRC2Q9NPJ4 139 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 RPRD1BQ9NQG5 326 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 C14orf119Q9NWQ9 140 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 KAAG1Q9UBP8 84 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 ENPP4Q9Y6X5 453 aa9.53□□□□□ -0.88
CHRNA1-207ENST00000435083 RNASEK-C17orf49H0YIS7 233 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 NPFFO15130 113 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 SERPINA1P01009 418 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 GABRA5P31644 462 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 OMPP47874 163 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 DLX1P56177 255 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 SF3A3Q12874 501 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 KLRD1Q13241 179 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 MICBQ29980 383 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 RFX4Q33E94 735 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 KPRPQ5T749 579 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 TEX36Q5VZQ5 186 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 METAP1DQ6UB28 335 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 LY6G5BQ8NDX9 201 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 OR4K13Q8NH42 304 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 MRAPQ8TCY5 172 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 SPTSSAQ969W0 71 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 FN3KQ9H479 309 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 CMTM6Q9NX76 183 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 MRPL15Q9P015 296 aaKnown RBP9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 FBLN5Q9UBX5 448 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 CYB5R1Q9UHQ9 305 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 SIGLEC9Q9Y336 463 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 FAM32AQ9Y421 112 aaKnown RBP9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 N6AMT1Q9Y5N5 214 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 PLXNB1O43157 2135 aa9.52□□□□□ -0.89
CHRNA1-207ENST00000435083 A0A1W2PRQ8 180 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 BHLHE40O14503 412 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 GPR37O15354 613 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 LHBP01229 141 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 LIPEQ05469 1076 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 MZT1Q08AG7 82 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 DGCR6Q14129 220 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 PCK2Q16822 640 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 WDR38Q5JTN6 314 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 GLYATL3Q5SZD4 288 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 C1orf122Q6ZSJ8 110 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 PNKDQ8N490 385 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 OR56B2PQ8NGI1 322 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 OR5R1Q8NH85 324 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 LRRC29Q8WV35 223 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 MAP6Q96JE9 813 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 SAR1AQ9NR31 198 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 MRGBPQ9NV56 204 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 FAM53CQ9NYF3 392 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 ADA2Q9NZK5 511 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 FOXJ3Q9UPW0 622 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 AP3M1Q9Y2T2 418 aa9.51□□□□□ -0.89
CHRNA1-207ENST00000435083 TRBV4-1A0A0J9YWV2 114 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 MEIOCA2RUB1 952 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms