RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MRPS28Q9Y2Q9 187 aaKnown RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 HS3ST3B1Q9Y662 390 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 C9J4A7 227 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CD8AP01732 235 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 HLA-AP01891 365 aaKnown RBP16.4■□□□□ 0.22
CLK1-205ENST00000434813 CHRM2P08172 466 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CCL3P10147 92 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 LIFP15018 202 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 GNB3P16520 340 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CTSSP25774 331 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CASRP41180 1078 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 ZNF133P52736 654 aaPredicted RBP16.4■□□□□ 0.22
CLK1-205ENST00000434813 CXADRP78310 365 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 C10orf128Q5T292 105 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 SFRP5Q5T4F7 317 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 TCEAL6Q6IPX3 200 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 SLC25A42Q86VD7 318 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 ZNF101Q8IZC7 436 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 ZNF283Q8N7M2 679 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 TCEAL3Q969E4 200 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 MRGPRFQ96AM1 343 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 SH2D2AQ9NP31 389 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 TRAV14DV4A0A0A6YYC5 116 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 SSX5O60225 188 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CSN2P05814 226 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 MSR1P21757 451 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CD34P28906 385 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CALCRP30988 508 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CSNK1A1P48729 337 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 DSCR4P56555 118 aaPredicted RBP16.4■□□□□ 0.22
CLK1-205ENST00000434813 OR52W1Q6IF63 320 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 GLIPR1L1Q6UWM5 242 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 GSG1LQ6UXU4 331 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 C17orf107Q6ZR85 190 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 FOXL2NBQ6ZUU3 175 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 FAM57BQ71RH2 274 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 RNF144BQ7Z419 303 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 CD163Q86VB7 1156 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 SCARB1Q8WTV0 552 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 FAM71F1Q96KD3 344 aaPredicted RBP16.4■□□□□ 0.22
CLK1-205ENST00000434813 NICN1Q9BSH3 213 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 ZNF416Q9BWM5 594 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 SELENOIQ9C0D9 397 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 PROK2Q9HC23 129 aa16.4■□□□□ 0.22
CLK1-205ENST00000434813 EIF1BO60739 113 aaKnown RBP16.39■□□□□ 0.21
CLK1-205ENST00000434813 IL2RAP01589 272 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 ZBTB25P24278 435 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 SSR4P51571 173 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 ZFP36L1Q07352 338 aaKnown RBP16.39■□□□□ 0.21
CLK1-205ENST00000434813 EIF3IQ13347 325 aaKnown RBP16.39■□□□□ 0.21
CLK1-205ENST00000434813 SLC22A6Q4U2R8 563 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 KCNG3Q8TAE7 436 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 SSC4DQ8WTU2 575 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 C17orf50Q8WW18 174 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 TMEM54Q969K7 222 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 WBP1Q96G27 269 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 SPACA5Q96QH8 159 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 ANAPC10Q9UM13 185 aa16.39■□□□□ 0.21
CLK1-205ENST00000434813 STK17BO94768 372 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 VAMP5O95183 116 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 IGLV3-1P01715 115 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 GSTP1P09211 210 aaKnown RBP16.38■□□□□ 0.21
CLK1-205ENST00000434813 HRH1P35367 487 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 CD96P40200 585 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 OR3A4PP47883 348 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 MC2RQ01718 297 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 FGL1Q08830 312 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 GK2Q14410 553 aaPredicted RBP16.38■□□□□ 0.21
CLK1-205ENST00000434813 FAM209AQ5JX71 171 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 RAET1LQ5VY80 246 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 LYG2Q86SG7 212 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 BEST3Q8N1M1 668 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 OR2Y1Q8NGV0 311 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 OR14K1Q8NGZ2 314 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 MFFQ9GZY8 342 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 NELFAQ9H3P2 528 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 MED9Q9NWA0 146 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 KCNK7Q9Y2U2 307 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 NOP16Q9Y3C1 178 aaKnown RBP16.38■□□□□ 0.21
CLK1-205ENST00000434813 EML6Q6ZMW3 1958 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 A0A0A6YYD4 124 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 TEX51A0A1B0GUA7 166 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 CDC14BO60729 498 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 HCKP08631 526 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 ZNF883P0CG24 379 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 CCL4P13236 92 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 POU3F2P20265 443 aaPredicted RBP16.38■□□□□ 0.21
CLK1-205ENST00000434813 AGTR1P30556 359 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 FAHD2BQ6P2I3 314 aaPredicted RBP16.38■□□□□ 0.21
CLK1-205ENST00000434813 TMEM104Q8NE00 496 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 OR6K3Q8NGY3 331 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 LRRC20Q8TCA0 184 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 FAHD2AQ96GK7 314 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
CLK1-205ENST00000434813 hCG_1807616A0A1W2PRN6 198 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 GP1BAP07359 652 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 NMBP08949 121 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 UBBP0CG47 229 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 HIST1H1DP16402 221 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms