RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 FPR3P25089 353 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 HMGA2P52926 109 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 SMIM11AP58511 58 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 FGF12P61328 243 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 PRKCDQ05655 676 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 KRR1Q13601 381 aaKnown RBP11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 ZBED5Q49AG3 693 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 OTPQ5XKR4 325 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 FBXW12Q6X9E4 464 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 OFCC1Q8IZS5 231 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 LRRC75AQ8NAA5 344 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 OR11L1Q8NGX0 322 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 DGCR14Q96DF8 476 aaKnown RBP11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 GABARAPL3Q9BY60 117 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 SYT4Q9H2B2 425 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 VNN3Q9NY84 501 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 NDUFAF4Q9P032 175 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 MMP24Q9Y5R2 645 aa11.2□□□□□ -0.62
CDC42EP1-204ENST00000434728 A0A0G2JK05 382 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 KIR2DS1A0A191URI9 304 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 SRRM5B3KS81 715 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 H0YL77 283 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 ZNF701M0R085 212 aaPredicted RBP11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 PHYHO14832 338 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 TIMM23O14925 209 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 RER1O15258 196 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 DBHP09172 617 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 CCDC159P0C7I6 412 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 CTLA4P16410 223 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 SELEP16581 610 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 BPIFB3P59826 476 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 CXCR4P61073 352 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 LSM6P62312 80 aaKnown RBP11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 ESRRGP62508 458 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 ZNF404Q494X3 552 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 MESTQ5EB52 335 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 ZNF691Q5VV52 312 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 OLFML2AQ68BL7 652 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 CYP4Z1Q86W10 505 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 RNF113BQ8IZP6 322 aaKnown RBP11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 OR4C15Q8NGM1 316 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 ACOT11Q8WXI4 607 aaPredicted RBP11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 DHRS1Q96LJ7 313 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 APOL4Q9BPW4 351 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 WDR76Q9H967 626 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 NOX4Q9NPH5 578 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 TMEM100Q9NV29 134 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 ATPIF1Q9UII2 106 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 TMEM5Q9Y2B1 443 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 COA3Q9Y2R0 106 aaPredicted RBP11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 FAM32AQ9Y421 112 aaKnown RBP11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 PCDHGB5Q9Y5G0 923 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 LYVE1Q9Y5Y7 322 aa11.19□□□□□ -0.62
CDC42EP1-204ENST00000434728 LOC100130705A0A1B0GUX0 176 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 J3KTA2 159 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 TNFRSF11BO00300 401 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 CSNK2BP67870 215 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 PAX2Q02962 417 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 SRSF4Q08170 494 aaKnown RBP11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 MALLQ13021 153 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 PDCD1Q15116 288 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 KCNJ8Q15842 424 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 FAM201AQ5SY85 155 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 FOXB2Q5VYV0 432 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 GPR139Q6DWJ6 353 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 DNM1P34Q6PK57 102 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 ZNF773Q6PK81 442 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 DCDC5Q6ZRR9 648 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 MBOAT2Q6ZWT7 520 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 LINC00471Q8N535 108 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 GJC3Q8NFK1 279 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 GIPC3Q8TF64 312 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 FAM71F1Q96KD3 344 aaPredicted RBP11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 KRT84Q9NSB2 600 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 PDP1Q9P0J1 537 aaPredicted RBP11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 COMMD3-BMI1R4GMX3 469 aa11.18□□□□□ -0.62
CDC42EP1-204ENST00000434728 A0A087WUU8 490 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 IQCF6A8MYZ5 107 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 CDC42EP2O14613 210 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 TOX4O94842 621 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 NDUFB2O95178 105 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 HLA-DPB1P04440 258 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 JUNBP17275 347 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 SDHAP31040 664 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 RRM2P31350 389 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 DAPP51397 102 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 ZNF181Q2M3W8 571 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 CCDC92Q53HC0 331 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 FGD3Q5JSP0 725 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 CD276Q5ZPR3 534 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 WDR25Q64LD2 544 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 RUSC1-AS1Q66K80 236 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 TSEN54Q7Z6J9 526 aaKnown RBP11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 ADCK1Q86TW2 530 aa11.17□□□□□ -0.62
CDC42EP1-204ENST00000434728 BOLLQ8N9W6 283 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms