RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SGCAQ16586 387 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 NKPD1Q17RQ9 610 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 FAM209AQ5JX71 171 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 FAM57BQ71RH2 274 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 NAA40Q86UY6 237 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 CD163Q86VB7 1156 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 PDZD9Q8IXQ8 264 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 ARRDC1Q8N5I2 433 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 KCNRGQ8N5I3 272 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 AGBL5Q8NDL9 886 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 OR4S1Q8NGB4 309 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 OR14K1Q8NGZ2 314 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 MITD1Q8WV92 249 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 NUDCD2Q8WVJ2 157 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 MR1Q95460 341 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 C10orf35Q96D05 121 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 RAB3CQ96E17 227 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 PGAM5Q96HS1 289 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 FAM71F1Q96KD3 344 aaPredicted RBP9.21□□□□□ -0.93
CD44-210ENST00000434472 IMMP1LQ96LU5 166 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 PDCD10Q9BUL8 212 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 CST11Q9H112 138 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 SLC25A32Q9H2D1 315 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 PRO3102Q9H379 93 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 GAREM1Q9H706 876 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 DKKL1Q9UK85 242 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 ASXL3Q9C0F0 2248 aa9.21□□□□□ -0.94
CD44-210ENST00000434472 A0A0U1RQV5 110 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 KANTRA0A1W2PQU2 76 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 MFSD2BA6NFX1 497 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 OR5H14A6NHG9 310 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 GJE1A6NN92 205 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZNF814B7Z6K7 855 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 NPIPA2E9PIF3 369 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 NPIPA3F8WFD2 350 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 RER1O15258 196 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 DNPH1O43598 174 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 SSX5O60225 188 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 CDC14BO60729 498 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 MPIG6BO95866 241 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 NMBP08949 121 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 CD63P08962 238 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 LIFP15018 202 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZNF250P15622 560 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HIST1H1DP16402 221 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 ABOP16442 354 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 GNB3P16520 340 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZP3P21754 424 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 MPGP29372 298 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZNF84P51523 738 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HIST1H3AP68431 136 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 H3F3AP84243 136 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 MC2RQ01718 297 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 MFAP5Q13361 173 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 VAX1Q5SQQ9 334 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 SFRP5Q5T4F7 317 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HIST2H3PS2Q5TEC6 136 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 PRAMEF20Q5VT98 475 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZNF660Q6AZW8 331 aaPredicted RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 RTL6Q6ICC9 239 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 C11orf87Q6NUJ2 197 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HIST2H3AQ71DI3 136 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HOGA1Q86XE5 327 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 OR5M9Q8NGP3 310 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 OR4K15Q8NH41 348 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 COQ8AQ8NI60 647 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 PAQR8Q8TEZ7 354 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 PCNPQ8WW12 178 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 NTNG2Q96CW9 530 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 CMBLQ96DG6 245 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 TMEM41AQ96HV5 264 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 GPER1Q99527 375 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 TMEM59Q9BXS4 323 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 REG4Q9BYZ8 158 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 NELFAQ9H3P2 528 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZNF160Q9HCG1 818 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 SDHAF2Q9NX18 166 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 TMA7Q9Y2S6 64 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 PTRH2Q9Y3E5 179 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 CDH23Q9H251 3354 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 A0A0B4J2A0 478 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZSCAN5BA6NJL1 495 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 KRBOX1C9JBD0 128 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 D6RAR5 112 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 NTN3O00634 580 aaPredicted RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 DHHO43323 396 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 DUS4LO95620 317 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 IGLV3-1P01715 115 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 COX6A1P12074 109 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HRH1P35367 487 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ALDH3B1P43353 468 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 SUCLG1P53597 346 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 IL13RA1P78552 427 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 CYCSP99999 105 aaKnown RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 PPA1Q15181 289 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 Q6ZSR3 168 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 HSD17B13Q7Z5P4 300 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms