RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 OR3A4PP47883 348 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 P2RY4P51582 365 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 GABREP78334 506 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 SMAD4Q13485 552 aaKnown RBP10.45□□□□□ -0.74
CD44-209ENST00000433892 ZNF345Q14585 488 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 ELP2Q6IA86 826 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 TMEM71Q6P5X7 295 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 ACOT7LQ6ZUV0 252 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 EIF4E3Q8N5X7 224 aaKnown RBP10.45□□□□□ -0.74
CD44-209ENST00000433892 DTWD2Q8NBA8 298 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 OR5L2Q8NGL0 311 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 OR4K15Q8NH41 348 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 RNF138Q8WVD3 245 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 TMEM41AQ96HV5 264 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 LPAR5Q9H1C0 372 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 MRPS28Q9Y2Q9 187 aaKnown RBP10.45□□□□□ -0.74
CD44-209ENST00000433892 WIF1Q9Y5W5 379 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 RTTNQ86VV8 2226 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 C13orf42A0A1B0GVH6 325 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 TRAF3IP2O43734 574 aaPredicted RBP10.45□□□□□ -0.74
CD44-209ENST00000433892 APOC3P02656 99 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 ZNF17P17021 662 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 HLA-GP17693 338 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 DCDP81605 110 aaKnown RBP10.45□□□□□ -0.74
CD44-209ENST00000433892 ZMYND11Q15326 602 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 SLC25A53Q5H9E4 307 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 PLAC9Q5JTB6 97 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 OR5AS1Q8N127 324 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 LHFPL5Q8TAF8 219 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 DNASE2BQ8WZ79 361 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 MICU1Q9BPX6 476 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 SCGNO76038 276 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 ZFAND5O76080 213 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 HCKP08631 526 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 QDPRP09417 244 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 MSX1P28360 303 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 ACY1Q03154 408 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 SHBQ15464 509 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 MICBQ29980 383 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 TFAP2EQ6VUC0 442 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 CPEB2Q7Z5Q1 589 aaKnown RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 BOLLQ8N9W6 283 aaKnown RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 THAP6Q8TBB0 222 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 RAB3CQ96E17 227 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 CRB3Q9BUF7 120 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 BARX1Q9HBU1 254 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 TAS2R3Q9NYW6 316 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 MBD2Q9UBB5 411 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 PISDQ9UG56 409 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 TRIM77I1YAP6 450 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 CDC14BO60729 498 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 DUS4LO95620 317 aaKnown RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 ZNF43P17038 809 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 CX3CR1P49238 355 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 GSK3AP49840 483 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 TMEM176BQ3YBM2 270 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 FAHD2BQ6P2I3 314 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 GUSBP11Q6P575 273 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 ATRAIDQ6UW56 229 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 UNQ6126/PRO20091Q6UXV3 157 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 MOB3CQ70IA8 216 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 FAM57BQ71RH2 274 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 HOGA1Q86XE5 327 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 INO80EQ8NBZ0 244 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 FAHD2AQ96GK7 314 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 C1orf147Q96MC9 270 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 GPER1Q99527 375 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 MOB1AQ9H8S9 216 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 AKIRIN1Q9H9L7 192 aaPredicted RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 FBLN5Q9UBX5 448 aa10.44□□□□□ -0.74
CD44-209ENST00000433892 MRPS17Q9Y2R5 130 aaKnown RBP10.44□□□□□ -0.74
CD44-209ENST00000433892 SULT2B1O00204 365 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 RAD51DO75771 328 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 CHRM2P08172 466 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 HIST1H1DP16402 221 aaKnown RBP10.43□□□□□ -0.74
CD44-209ENST00000433892 TBPP20226 339 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 CNR1P21554 472 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 SERPINF1P36955 418 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 NPY4RP50391 375 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 ARHGDIBP52566 201 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 TMEM50BP56557 158 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 PRAMEF20Q5VT98 475 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 SLC25A47Q6Q0C1 308 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 OR2W3Q7Z3T1 314 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 OR2M3Q8NG83 312 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 OR6X1Q8NH79 312 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 TERB2Q8NHR7 220 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 FBXW5Q969U6 566 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 ZC3H10Q96K80 434 aaKnown RBP10.43□□□□□ -0.74
CD44-209ENST00000433892 SPSB2Q99619 263 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 LDAHQ9H6V9 325 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 GAREM1Q9H706 876 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 PNRC2Q9NPJ4 139 aaKnown RBP10.43□□□□□ -0.74
CD44-209ENST00000433892 C12orf4Q9NQ89 552 aa10.43□□□□□ -0.74
CD44-209ENST00000433892 CACNA1EQ15878 2313 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 IGLV3-32A0A0A0MS00 114 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 A0A1B0GW55 424 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms