RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 DHFR2Q86XF0 187 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CALHM1Q8IU99 346 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NRMQ8IXM6 262 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 OR2D3Q8NGH3 330 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 C7orf33Q8WU49 177 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 IFT81Q8WYA0 676 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PTH2Q96A98 100 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PPWD1Q96BP3 646 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 SGTBQ96EQ0 304 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 MICU1Q9BPX6 476 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 UCK2Q9BZX2 261 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PIGUQ9H490 435 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZSCAN16Q9H4T2 348 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 RETNQ9HD89 108 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 C1orf109Q9NX04 203 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF282Q9UDV7 671 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 RWDD2AQ9UIY3 292 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 GUCA1BQ9UMX6 200 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 SAMD4AQ9UPU9 718 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 RNF6Q9Y252 685 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ACOT9Q9Y305 439 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 MYH3P11055 1940 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ASTN1O14525 1302 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PCF11O94913 1555 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 RPAP1Q9BWH6 1393 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 A0A0J9YXY3 114 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 A0A1B0GV90 55 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 A0A1B0GVI7 797 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TVP23AA6NH52 213 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 C9J4A7 227 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 F5H5T6 163 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 SLC31A2O15432 143 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ENSAO43768 121 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 SMIM24O75264 130 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CNIH1O95406 144 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CTDNEP1O95476 244 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 C1orf105O95561 183 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 AP2A1O95782 977 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CD5P06127 495 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CRHP06850 196 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 DCNP07585 359 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 OCM2P0CE71 109 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 UQCRBP14927 111 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NQO1P15559 274 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 IGLL1P15814 213 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 HTR1EP28566 365 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 HTR1FP30939 366 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CSKP41240 450 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 MAGEA3P43357 314 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 GPR1P46091 355 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 RFX3P48380 749 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 HCAR3P49019 387 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PRLHRP49683 370 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CRISP1P54107 249 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CLDN12P56749 244 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 RAB10P61026 200 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 RANP62826 216 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 CCL7P80098 99 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PDIA2Q13087 525 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 MED21Q13503 144 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ATXN7L3Q14CW9 347 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF77Q15935 545 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TRIM16LQ309B1 348 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 RFX4Q33E94 735 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TIGITQ495A1 244 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 SLC36A2Q495M3 483 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ACSM3Q53FZ2 586 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 SYPL2Q5VXT5 272 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NPSR1Q6W5P4 371 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CERS6Q6ZMG9 384 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 LHFPL3Q86UP9 236 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TRAPPC5Q8IUR0 188 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 OR2L13Q8N349 312 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 MREGQ8N565 214 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CLDN19Q8N6F1 224 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF738Q8NE65 137 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NOXO1Q8NFA2 376 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PXT1Q8NFP0 134 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 OR4F6Q8NGB9 312 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 LYPD6BQ8NI32 183 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PIGXQ8TBF5 258 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TRUB1Q8WWH5 349 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 NELFBQ8WX92 580 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 RPEQ96AT9 228 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 JSRP1Q96MG2 331 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 NIPSNAP1Q9BPW8 284 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NUDT9Q9BW91 350 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ULBP1Q9BZM6 244 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZYG11BQ9C0D3 744 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ILKAPQ9H0C8 392 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 SYT4Q9H2B2 425 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF430Q9H8G1 570 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 ISYNA1Q9NPH2 558 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZC4H2Q9NQZ6 224 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NANSQ9NR45 359 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 SMPXQ9UHP9 88 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF223Q9UK11 482 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 SCML2Q9UQR0 700 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ASB4Q9Y574 426 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms