RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 XRCC2O43543 280 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 LMX1BO60663 402 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 GZMKP49863 264 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 MVKQ03426 396 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 HNRNPA0Q13151 305 aaKnown RBP12.86□□□□□ -0.35
PTCD1-204ENST00000430982 KCTD18Q6PI47 426 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-204ENST00000430982 RHOUQ7L0Q8 258 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 OR2V2Q96R30 315 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 OR10A2Q9H208 303 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 ADGRL4Q9HBW9 690 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 WARS2Q9UGM6 360 aaKnown RBP12.86□□□□□ -0.35
PTCD1-204ENST00000430982 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 LRP12Q9Y561 859 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 TMEM14AQ9Y6G1 99 aa12.86□□□□□ -0.35
PTCD1-204ENST00000430982 IGHV3-64DA0A0J9YX35 117 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 F5H5P2 479 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 MLNRO43193 412 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 APOL3O95236 402 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 HTR1FP30939 366 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 IL2RGP31785 369 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 SLC3A1Q07837 685 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 OR56B2PQ8NGI1 322 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 OR52H1Q8NGJ2 320 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 CLDND2Q8NHS1 167 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 ASB17Q8WXJ9 295 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 UBE2FQ969M7 185 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 MEGF10Q96KG7 1140 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 HRASLS5Q96KN8 279 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 MROQ9BYG7 248 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 OPA3Q9H6K4 179 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 NIPAL2Q9H841 368 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 IKZF2Q9UKS7 526 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 GMPPBQ9Y5P6 360 aa12.85□□□□□ -0.35
PTCD1-204ENST00000430982 PRR32B1ATL7 298 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 WNT9BO14905 357 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 KCNAB3O43448 404 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 SBK2P0C263 348 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 CA6P23280 308 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 ATP6V1E1P36543 226 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 RBMXP38159 391 aaKnown RBP12.84□□□□□ -0.35
PTCD1-204ENST00000430982 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
PTCD1-204ENST00000430982 PSMA6P60900 246 aaKnown RBP12.84□□□□□ -0.35
PTCD1-204ENST00000430982 RCN1Q15293 331 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 OR8G1Q15617 311 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 ZNF322Q6U7Q0 402 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-204ENST00000430982 PRSS45Q7RTY3 260 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 RFLNBQ8N5W9 214 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 TRUB1Q8WWH5 349 aaKnown RBP12.84□□□□□ -0.35
PTCD1-204ENST00000430982 RAB1CQ92928 201 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 RFKQ969G6 155 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 SPSB4Q96A44 273 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 OR8B4Q96RC9 309 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 MNTQ99583 582 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 TBX5Q99593 518 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 CLN6Q9NWW5 311 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 DCAF16Q9NXF7 216 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 HAO2Q9NYQ3 351 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 ZNF319Q9P2F9 582 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 WIPI2Q9Y4P8 454 aa12.84□□□□□ -0.35
PTCD1-204ENST00000430982 LOC100289279A0A1B0GTE1 492 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 ISPDA4D126 451 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 PHYHO14832 338 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 ANPEPP15144 967 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 CFL1P23528 166 aaKnown RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 CFPP27918 469 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 RIDAP52758 137 aaKnown RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 CXCR4P61073 352 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 FAM3AP98173 230 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 POU4F2Q12837 409 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 FAM120AOSQ5T036 256 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 DEGS2Q6QHC5 323 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 ZNF771Q7L3S4 317 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 GALNT4Q8N4A0 578 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 HPS1Q92902 700 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 DVL3Q92997 716 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 MSI2Q96DH6 328 aaKnown RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 SOX7Q9BT81 388 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 ADAT1Q9BUB4 502 aaKnown RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 SLC22A4Q9H015 551 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 TMEM106BQ9NUM4 274 aa12.83□□□□□ -0.36
PTCD1-204ENST00000430982 NOP16Q9Y3C1 178 aaKnown RBP12.83□□□□□ -0.36
PTCD1-204ENST00000430982 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
PTCD1-204ENST00000430982 TMEM269A0A1B0GVZ9 245 aa12.82□□□□□ -0.36
PTCD1-204ENST00000430982 ERICH4A6NGS2 130 aa12.82□□□□□ -0.36
PTCD1-204ENST00000430982 ANKRD30BLA7E2S9 258 aa12.82□□□□□ -0.36
PTCD1-204ENST00000430982 E9PQ18 207 aa12.82□□□□□ -0.36
PTCD1-204ENST00000430982 MAGEB4O15481 346 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms