RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 IL20Q9NYY1 176 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 COMMD3-BMI1R4GMX3 469 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 NDUFA7O95182 113 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 ECDO95905 644 aaPredicted RBP12.35□□□□□ -0.43
MSH5-208ENST00000429846 SFTPBP07988 381 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 OMGP23515 440 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 PYCR1P32322 319 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 DDOSTP39656 456 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 HMGA2P52926 109 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 RAG2P55895 527 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 PDCD1Q15116 288 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 PCK2Q16822 640 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 GLYATL3Q5SZD4 288 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 SFRP4Q6FHJ7 346 aaPredicted RBP12.35□□□□□ -0.43
MSH5-208ENST00000429846 FIP1L1Q6UN15 594 aaKnown RBP12.35□□□□□ -0.43
MSH5-208ENST00000429846 C17orf107Q6ZR85 190 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 DCXRQ7Z4W1 244 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 GCSAMQ8N6F7 178 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 CYB561A3Q8NBI2 242 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 WDFY2Q96P53 400 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 TBX15Q96SF7 602 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 DDOQ99489 341 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 TRIM15Q9C019 465 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 EGLN3Q9H6Z9 239 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 MARCH7Q9H992 704 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 NDE1Q9NXR1 346 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 KAAG1Q9UBP8 84 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 LYVE1Q9Y5Y7 322 aa12.35□□□□□ -0.43
MSH5-208ENST00000429846 TVP23AA6NH52 213 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 A6NLC8 198 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 MELTFP08582 738 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 FMO3P31513 532 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 RPS27P42677 84 aaKnown RBP12.34□□□□□ -0.43
MSH5-208ENST00000429846 SLC15A1P46059 708 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 ENTPD1P49961 510 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 BLVRAP53004 296 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 GRB2P62993 217 aaKnown RBP12.34□□□□□ -0.43
MSH5-208ENST00000429846 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 RUSC1-AS1Q66K80 236 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 OLFML2AQ68BL7 652 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 RASSF6Q6ZTQ3 369 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 FAM90A1Q86YD7 464 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 BOLLQ8N9W6 283 aaKnown RBP12.34□□□□□ -0.43
MSH5-208ENST00000429846 OR56B2PQ8NGI1 322 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 DYRK2Q92630 601 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 TAF15Q92804 592 aaKnown RBP eCLIP12.34□□□□□ -0.43
MSH5-208ENST00000429846 SPSB4Q96A44 273 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 SLAMF6Q96DU3 332 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 KCNJ15Q99712 375 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 CHIAQ9BZP6 476 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 SMURF1Q9HCE7 757 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 ACOXLQ9NUZ1 547 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 C1orf123Q9NWV4 160 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 BAIAP2Q9UQB8 552 aa12.34□□□□□ -0.43
MSH5-208ENST00000429846 CENPVL3A0A0U1RRI6 287 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 hCG_1807616A0A1W2PRN6 198 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 ANKRD30BLA7E2S9 258 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 SNX3O60493 162 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 TIPRLO75663 272 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 LHBP01229 141 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 SPARCP09486 303 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 GRK5P34947 590 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 TAF13Q15543 124 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 LNX2Q8N448 690 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 SLC37A3Q8NCC5 494 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 OR9Q2Q8NGE9 314 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 OR8S1Q8NH09 359 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 TBC1D15Q8TC07 691 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 DMRTB1Q96MA1 342 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 SIRPDQ9H106 197 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 TOR3AQ9H497 397 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 SP140LQ9H930 580 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 RNPEPL1Q9HAU8 725 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 TBC1D23Q9NUY8 699 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 C1RLQ9NZP8 487 aa12.33□□□□□ -0.44
MSH5-208ENST00000429846 IGHV1-69DA0A0B4J2H0 117 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 TNFRSF11BO00300 401 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 IGHV1-69P01742 117 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 APOC1P02654 83 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 GYPAP02724 150 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 GRPP07492 148 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 PSKH1P11801 424 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 MUC1P15941 1255 aaPredicted RBP12.32□□□□□ -0.44
MSH5-208ENST00000429846 ANOS1P23352 680 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 CFL1P23528 166 aaKnown RBP12.32□□□□□ -0.44
MSH5-208ENST00000429846 MAGEA2P43356 314 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 PRKXP51817 358 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 SLC25A1P53007 311 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
MSH5-208ENST00000429846 PDLIM3Q53GG5 364 aaPredicted RBP12.32□□□□□ -0.44
MSH5-208ENST00000429846 ZNF770Q6IQ21 691 aaPredicted RBP12.32□□□□□ -0.44
MSH5-208ENST00000429846 LYPD4Q6UWN0 246 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 C16orf89Q6UX73 402 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms