RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TMEM88BA6NKF7 163 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR4C45A6NMZ5 311 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF736B4DX44 427 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 M0QZ24 198 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 GOSR1O95249 250 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 SYNGR4O95473 234 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR5G3P0C626 314 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 GIMD1P0DJR0 217 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ACRP10323 421 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CST5P28325 142 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 GRK4P32298 578 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ARRB1P49407 418 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CLDN18P56856 261 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC9A3R2Q15599 337 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 PRSS8Q16651 343 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 DECR1Q16698 335 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 AMZ1Q400G9 498 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 FBLN7Q53RD9 439 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 AGBL4Q5VU57 503 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 C1orf189Q5VU69 101 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 STAC2Q6ZMT1 411 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 TEX43Q6ZNM6 134 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 BHLHA15Q7RTS1 189 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 KDM8Q8N371 416 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR2L2Q8NH16 312 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR51A7Q8NH64 312 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF563Q8TA94 476 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 TBX15Q96SF7 602 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 LGR4Q9BXB1 951 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 MRPL13Q9BYD1 178 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CST9LQ9H4G1 147 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 MKKSQ9NPJ1 570 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 SOHLH2Q9NX45 425 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZDHHC3Q9NYG2 299 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 SIGLEC7Q9Y286 467 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 COX11Q9Y6N1 276 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CHD3Q12873 2000 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 IGLV3-10A0A075B6K4 115 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 IGHV2OR16-5A0A0B4J2B6 119 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF860A6NHJ4 632 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 COCHO43405 550 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CTSVO60911 334 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 TBX18O95935 607 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CYB5AP00167 134 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 MAKP20794 623 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 NTSP30990 170 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 LBX1P52954 281 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 RPS13P62277 151 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ST3GAL3Q11203 375 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 TMEM183BQ1AE95 376 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 KLHL24Q6TFL4 600 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CMTM1Q8IZ96 169 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 D2HGDHQ8N465 521 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR8G5Q8NG78 346 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ABHD3Q8WU67 409 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 MCHR2Q969V1 340 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 RELTQ969Z4 430 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 KTI12Q96EK9 354 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 IL17FQ96PD4 163 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 CIB3Q96Q77 187 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR11A1Q9GZK7 315 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
CDC42BPA-206ENST00000429440 C9orf172C9J069 976 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 M0QYG6 137 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 GJB3O75712 270 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 SOD2P04179 222 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 SRP19P09132 144 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 BMP5P22003 454 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 PRKAG1P54619 331 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 TAS2R41P59536 307 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 TAS2R31P59538 309 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 PNRC1Q12796 327 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 FOXF1Q12946 379 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 GPR18Q14330 331 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 TP53I3Q53FA7 332 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 EXOSC6Q5RKV6 272 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF836Q6ZNA1 936 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 TGIF2LYQ8IUE0 185 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 STPG4Q8N801 248 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 TET1Q8NFU7 2136 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR4D5Q8NGN0 318 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 IGSF8Q969P0 613 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC6A7Q99884 636 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 PYGO2Q9BRQ0 406 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC12A9Q9BXP2 914 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF552Q9H707 407 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 MED20Q9H944 212 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 SMPXQ9UHP9 88 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 CDV3Q9UKY7 258 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 MKI67P46013 3256 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 MEIS3P1A6NDR6 274 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 RBFOX3A6NFN3 312 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 ANKUB1A6NFN9 424 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 HMGN4O00479 90 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 GRM6O15303 877 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 ETHE1O95571 254 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 STAG3L3P0CL85 134 aa7.92□□□□□ -1.14
CDC42BPA-206ENST00000429440 CEACAM1P13688 526 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms