RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 OR5AS1Q8N127 324 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 MEIOBQ8N635 442 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 OR56B4Q8NH76 319 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 OR2AE1Q8NHA4 323 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GIMAP1Q8WWP7 306 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SPTSSAQ969W0 71 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SCMH1Q96GD3 660 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 MS4A3Q96HJ5 214 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 MED28Q9H204 178 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GHITMQ9H3K2 345 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GPR35Q9HC97 309 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 ASCL3Q9NQ33 180 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 PAIP2BQ9ULR5 123 aaKnown RBP9.12□□□□□ -0.95
HDAC9-210ENST00000428307 FRYQ5TBA9 3013 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 IGKV1-9A0A0C4DH69 117 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SYNGR4O95473 234 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 CD3DP04234 171 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GTF2F2P13984 249 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 FAHP16930 419 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 CCL1P22362 96 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SLC10A1Q14973 349 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 LINC00303Q3SY05 128 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 PGAP1Q75T13 922 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SLC16A14Q7RTX9 510 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 CHST4Q8NCG5 386 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 OR5D18Q8NGL1 313 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GPER1Q99527 375 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 UQCC2Q9BRT2 126 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 LDAHQ9H6V9 325 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF552Q9H707 407 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-210ENST00000428307 EXO5Q9H790 373 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 NOX3Q9HBY0 568 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SLC7A10Q9NS82 523 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 LIPGQ9Y5X9 500 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 MUC6Q6W4X9 2439 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 C7orf66A4D0T2 115 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 METTL21EPA6NDL7 271 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 TMEM235A6NFC5 223 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 NAP1L6A6NFF2 107 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 ARPC1BO15143 372 aaKnown RBP9.11□□□□□ -0.95
HDAC9-210ENST00000428307 LRP3O75074 770 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 TPPPO94811 219 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 ERCC1P07992 297 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-210ENST00000428307 CST2P09228 141 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 WT1P19544 449 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-210ENST00000428307 OR3A4PP47883 348 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 PSG4Q00888 419 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 ST3GAL2Q16842 350 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF766Q5HY98 468 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 RIPPLY2Q5TAB7 128 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 GLIPR1L1Q6UWM5 242 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 SKA3Q8IX90 412 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 PRSS33Q8NF86 280 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 OR4C16Q8NGL9 310 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 SEH1LQ96EE3 360 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 OR51J1Q9H342 316 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 ING3Q9NXR8 418 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 RAB22AQ9UL26 194 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 PIGLQ9Y2B2 252 aa9.11□□□□□ -0.95
HDAC9-210ENST00000428307 A0A096LPE4 126 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 A0A1W2PPZ6 126 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 RAB27BO00194 218 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 ZNHIT1O43257 154 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 SYNGR3O43761 229 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 PEX14O75381 377 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 DHRS3O75911 302 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 HPXP02790 462 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 LCATP04180 440 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 CD82P27701 267 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 HTR5AP47898 357 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 RRADP55042 308 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 QRFPP83859 136 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 HGFACQ04756 655 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 NOXA1Q86UR1 476 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 ZFP62Q8NB50 900 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-210ENST00000428307 TMEM104Q8NE00 496 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 OR1F12Q8NHA8 337 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 GPX8Q8TED1 209 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 HAS2Q92819 552 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 SGK3Q96BR1 496 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 ACTR6Q9GZN1 396 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 MCTS1Q9ULC4 181 aaKnown RBP9.1□□□□□ -0.95
HDAC9-210ENST00000428307 MRPS28Q9Y2Q9 187 aaKnown RBP9.1□□□□□ -0.95
HDAC9-210ENST00000428307 TIMM10BQ9Y5J6 103 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 BOD1L1Q8NFC6 3051 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 GVINP1Q7Z2Y8 2422 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 A0A0U1RQV5 110 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 A0A1W2PP11 408 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 WIPF3A6NGB9 483 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 APOC1P02654 83 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 CSF1P09603 554 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 CXCL3P19876 107 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 CRYGSP22914 178 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 STOMP27105 288 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 NUBP1P53384 320 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-210ENST00000428307 PMP22Q01453 160 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 SCRN3Q0VDG4 424 aa9.1□□□□□ -0.95
HDAC9-210ENST00000428307 RAB35Q15286 201 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms