RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 OR51Q1Q8NH59 317 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 SPATA3Q8NHX4 192 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 RNF138Q8WVD3 245 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 PCNPQ8WW12 178 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 DYRK2Q92630 601 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZMYND19Q96E35 227 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZHX1-C8orf76Q96EF9 292 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 C2orf48Q96LS8 159 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF599Q96NL3 588 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF385AQ96PM9 386 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ALKBH3Q96Q83 286 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 RASL11BQ9BPW5 248 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 MRPL45Q9BRJ2 306 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 RHNO1Q9BSD3 238 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 MAP1LC3AQ9H492 121 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 NT5DC2Q9H857 520 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 EXOSC3Q9NQT5 275 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 KCNS2Q9ULS6 477 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 HHLA2Q9UM44 414 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 NDRG2Q9UN36 371 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TP53TG1Q9Y2A0 90 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 NDUFAF1Q9Y375 327 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 NUP153P49790 1475 aaKnown RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 MSH6P52701 1360 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CLDN24A6NM45 220 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 K7EMT4 169 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 TNFRSF11BO00300 401 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 NME4O00746 187 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF749O43361 778 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PI15O43692 258 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 EIF3GO75821 320 aaKnown RBP eCLIP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 SOX14O95416 240 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CLDN1O95832 211 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 LALBAP00709 142 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 IGHV4-39P01824 125 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CD74P04233 296 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CRHP06850 196 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 FCGR3AP08637 254 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 HLA-DOBP13765 273 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 LIFP15018 202 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF250P15622 560 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 WARSP23381 471 aaKnown RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 F2RP25116 425 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PMELP40967 661 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 GLP1RP43220 463 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 GSSP48637 474 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 SRP9P49458 86 aaKnown RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 FABP6P51161 128 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 SUB1P53999 127 aaKnown RBP eCLIP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DVL1P1P54792 670 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 FGF8P55075 233 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DLX1P56177 255 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 TCL1AP56279 114 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 RAB38P57729 211 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 ARG2P78540 354 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 MRPS11P82912 194 aaKnown RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 OR2F1Q13607 317 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 EDDM3AQ14507 147 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CLINT1Q14677 625 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 HLA-DRB5Q30154 266 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DEFB115Q30KQ5 88 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PARP15Q460N3 678 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PYCR3Q53H96 274 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 ACER2Q5QJU3 275 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 HIST2H3PS2Q5TEC6 136 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 OLFML2AQ68BL7 652 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 REP15Q6BDI9 236 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 FAM71E1Q6IPT2 247 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 C8orf82Q6P1X6 216 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 TNFAIP8L2Q6P589 184 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CYHR1Q6ZMK1 362 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PRSS41Q7RTY9 318 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM144Q7Z5S9 345 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DHFR2Q86XF0 187 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CBLN2Q8IUK8 224 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 FBXO16Q8IX29 292 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PIANPQ8IYJ0 282 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DAW1Q8N136 415 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 LRRC25Q8N386 305 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CLDN22Q8N7P3 220 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 HSD17B11Q8NBQ5 300 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 NEXN-AS1Q8NBZ9 246 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 KBTBD8Q8NFY9 601 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PIFOQ8TCI5 191 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 GATAD1Q8WUU5 269 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 FGGYQ96C11 551 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DDIT4LQ96D03 193 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 MRAP2Q96G30 205 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 PAGE5Q96GU1 130 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 URB1-AS1Q96HZ7 61 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 BTF3L4Q96K17 158 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 MAGEB18Q96M61 343 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 ZIM3Q96PE6 472 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 TSC22D3Q99576 134 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 DOK1Q99704 481 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 MCHR1Q99705 422 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 OSBPL11Q9BXB4 747 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF717Q9BY31 904 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-205ENST00000424674 CSTL1Q9H114 145 aa3.04□□□□□ -1.92
SF3B1-205ENST00000424674 SPANXA1Q9NS26 97 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms