RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SIRT4Q9Y6E7 314 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-203ENST00000424270 IGLV1-36A0A0B4J1U3 117 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 IGKV1D-43A0A0B4J1Z2 117 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 OR6C6A6NF89 314 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 GGT3PA6NGU5 568 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 SERPINE3A8MV23 424 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 G3V2L1 256 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 J3QW42 95 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 GMDSO60547 372 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 TIPRLO75663 272 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 DBHP09172 617 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 IGHV4-30-4P0DP06 118 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 CPA3P15088 417 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 SPNP16150 400 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 BGNP21810 368 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 NAA10P41227 235 aaPredicted RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 DNAJB13P59910 316 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 GABPB1Q06547 395 aaPredicted RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 MPP2Q14168 576 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 ENDOGQ14249 297 aaKnown RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 SEC23BQ15437 767 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 ZNF74Q16587 644 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 ARMC4Q5T2S8 1044 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 ZSCAN2Q7Z7L9 614 aaPredicted RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 SYT9Q86SS6 491 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 DYNAPQ8N1N2 210 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 HDAC2Q92769 488 aaKnown RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 EME1Q96AY2 570 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 MALSU1Q96EH3 234 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 ITCHQ96J02 903 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 PPP1R36Q96LQ0 422 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 FAM110AQ9BQ89 295 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 SLC25A33Q9BSK2 321 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 MRPL13Q9BYD1 178 aaKnown RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 TUBA4BQ9H853 241 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 ISYNA1Q9NPH2 558 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 VNN3Q9NY84 501 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 MRPL15Q9P015 296 aaKnown RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 ZNF180Q9UJW8 692 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 NDUFAF1Q9Y375 327 aa5□□□□□ -1.61
SDCBP-203ENST00000424270 TBL2Q9Y4P3 447 aaKnown RBP5□□□□□ -1.61
SDCBP-203ENST00000424270 A0A0B4J2E0 115 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 A0A1B0GX12 115 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 RHBDL1O75783 438 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 LCATP04180 440 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SPARCP09486 303 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 PGA5P0DJD9 388 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 ARSBP15848 533 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 JUNBP17275 347 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-203ENST00000424270 CD24P25063 80 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 CNTFRP26992 372 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 AQP2P41181 271 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 CENPAP49450 140 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 ARHGDIBP52566 201 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 CLNS1AP54105 237 aaKnown RBP4.99□□□□□ -1.61
SDCBP-203ENST00000424270 UGT2B15P54855 530 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 NME5P56597 212 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 RPL18Q07020 188 aaKnown RBP4.99□□□□□ -1.61
SDCBP-203ENST00000424270 AQP6Q13520 282 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 GK2Q14410 553 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SNAPC1Q16533 368 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SPANXN4Q5MJ08 99 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 RNLSQ5VYX0 342 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 C8orf74Q6P047 294 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SLC25A47Q6Q0C1 308 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 C16orf82Q7Z2V1 217 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 DPY19L4Q7Z388 723 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 ZNF429Q86V71 674 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 KRT73Q86Y46 540 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 OR13D1Q8NGV5 346 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 FNDC8Q8TC99 324 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 TCP10LQ8TDR4 215 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 CHPT1Q8WUD6 406 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SEH1LQ96EE3 360 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 MPP4Q96JB8 637 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SPATA5L1Q9BVQ7 753 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 RETNQ9HD89 108 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 SLCO1B3Q9NPD5 702 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 POLE4Q9NR33 117 aa4.99□□□□□ -1.61
SDCBP-203ENST00000424270 THUMPD1Q9NXG2 353 aaKnown RBP4.99□□□□□ -1.61
SDCBP-203ENST00000424270 PLECQ15149 4684 aaKnown RBP4.99□□□□□ -1.61
SDCBP-203ENST00000424270 A0A087WUV0 522 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-203ENST00000424270 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 NUPR2A6NF83 97 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CPSF4LA6NMK7 179 aaKnown RBP4.98□□□□□ -1.61
SDCBP-203ENST00000424270 E9PBE3 544 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 F5H5K5 113 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 BHLHE40O14503 412 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 RFXANKO14593 260 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 IMPA2O14732 288 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 TFF1P04155 84 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CHRNGP07510 517 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 BRS3P32247 399 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 GNALP38405 381 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CDKN2CP42773 168 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CTXN1P60606 82 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 EMX2Q04743 252 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 IL18R1Q13478 541 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CASP8Q14790 479 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms